Regulon of SoxR in Pseudomonas mendocina ymp
| Regulator type: | Transcription factor |
| TF locus tag: | Pmen_1341 |
| Regulator family: | MerR |
| Regulation mode: | activator (repressor) |
| Biological process: | Superoxide stress response |
| Effector: | Paraquat |
| Regulog: | SoxR - Pseudomonadaceae |
| Statistics of regulated genes: | |
| - Genes | 2 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Pseudomonadaceae
- By trascription factor - SoxR
- By TF family - MerR
- By effector - Paraquat
- By pathway - Superoxide stress response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -63
Score: 6.6 Sequence: ACCTTAAGTTAAGTTGAGGT
Locus tag: Pmen_1342
Name: PF03358 Funciton: NADPH-dependent FMN reductase |
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PF03358
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NADPH-dependent FMN reductase
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Position: -35
Score: 6.6 Sequence: ACCTCAACTTAACTTAAGGT
Locus tag: Pmen_1341
Name: soxR Funciton: Redox-sensitive transcriptional activator, MerR family |
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soxR
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Redox-sensitive transcriptional activator, MerR family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |