Profile of regulator SoxR in Pseudomonadaceae
Properties
| Regulator family: |
MerR |
| Regulation mode: |
activator (repressor) |
| Biological process: |
Superoxide stress response |
| Effector: |
Paraquat |
| Regulog: |
SoxR - Pseudomonadaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Pseudomonas aeruginosa PAO1
|
|
PA2274 |
PF03992 |
-67 |
6.4 |
ACCTCAAGTTTGCTTGAGGT |
|
PA4205 |
mexG |
-125 |
6.9 |
ACCTCAACTTAACTTGAGGT |
|
PA3718 |
PF07690 |
-83 |
6.7 |
ACCTCAAGTTAACTTGAGCT |
|
PA2273 |
soxR |
-30 |
6.4 |
ACCTCAAGCAAACTTGAGGT |
|
Pseudomonas entomophila L48
|
|
PSEEN3529 |
PF03992 |
-71 |
6.3 |
ACCTTGAGTTAACTGGAGGT |
|
PSEEN3530 |
soxR |
-34 |
6.3 |
ACCTCCAGTTAACTCAAGGT |
|
PSEEN2338 |
PF01042 |
-59 |
6.3 |
ACCTCGACTTAACCCGAGGT |
|
Pseudomonas putida KT2440
|
|
PP2235 |
PF03992 |
-71 |
6.1 |
ACCTTGACTTTACTTGAGGT |
|
PP2064 |
mexH |
-76 |
6.2 |
ACCTCAAGTAAAGTTGAGCT |
|
PP2506 |
PF09933 |
-26 |
6.3 |
ACCTCGAGTTAAGTCAAGGT |
|
PP3522 |
PF01042 |
-60 |
6.6 |
ACCTCGAGTTAACTTAAGGT |
|
PP2060 |
soxR |
-29 |
6 |
AGCTCAACTTAACTTTAGGT |
|
Pseudomonas fluorescens Pf-5
|
|
PFL_4160 |
soxR |
-50 |
6.1 |
ACCTCTAGTTAAGTCAAGGT |
|
PFL_4159 |
PF03992 |
-78 |
6.1 |
ACCTTGACTTAACTAGAGGT |
|
Pseudomonas mendocina ymp
|
|
Pmen_1341 |
soxR |
-35 |
6.6 |
ACCTCAACTTAACTTAAGGT |
|
Pmen_1342 |
PF03358 |
-63 |
6.6 |
ACCTTAAGTTAAGTTGAGGT |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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|
