Regulon of SoxR in Pseudomonas putida KT2440

Properties
Regulator type:	Transcription factor
TF locus tag:	PP2060
Regulator family:	MerR
Regulation mode:	activator (repressor)
Biological process:	Superoxide stress response
Effector:	Paraquat
Regulog:	SoxR - Pseudomonadaceae
Statistics of regulated genes:
- Genes	7
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 16 sites [see more]

Member of regulog collections

By taxonomy - Pseudomonadaceae
By trascription factor - SoxR
By TF family - MerR
By effector - Paraquat
By pathway - Superoxide stress response

Regulated operons
	Locus Tag	Name	Function
Position: -29 Score: 6 Sequence: AGCTCAACTTAACTTTAGGT Locus tag: PP2060 Name: soxR Funciton: Redox-sensitive transcriptional activator, MerR family
	PP2060	soxR	Redox-sensitive transcriptional activator, MerR family
Position: -26 Score: 6.3 Sequence: ACCTCGAGTTAAGTCAAGGT Locus tag: PP2506 Name: PF09933 Funciton: Membrane protein Locus tag: PP2507 Name: PF00106 Funciton: oxidoreductase, short-chain dehydrogenase/reductase family
	PP2506	PF09933	Membrane protein
	PP2507	PF00106	oxidoreductase, short-chain dehydrogenase/reductase family
Position: -76 Score: 6.2 Sequence: ACCTCAAGTAAAGTTGAGCT Locus tag: PP2064 Name: mexH Funciton: RND transporter, membrane fusion protein Locus tag: PP2065 Name: mexI Funciton: RND transporter, membrane fusion protein
	PP2064	mexH	RND transporter, membrane fusion protein
	PP2065	mexI	RND transporter, membrane fusion protein
Position: -60 Score: 6.6 Sequence: ACCTCGAGTTAACTTAAGGT Locus tag: PP3522 Name: PF01042 Funciton: Endoribonuclease L-PSP
	PP3522	PF01042	Endoribonuclease L-PSP
Position: -71 Score: 6.1 Sequence: ACCTTGACTTTACTTGAGGT Locus tag: PP2235 Name: PF03992 Funciton: Monooxygenase
	PP2235	PF03992	Monooxygenase

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD