Regulon of GntR in Vibrio harveyi ATCC BAA-1116

Properties
Regulator type:	Transcription factor
TF locus tag:	VIBHAR_00507
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Gluconate utilization
Effector:	Gluconate
Regulog:	GntR - Vibrionales
Statistics of regulated genes:
- Genes	5
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 33 sites [see more]

Member of regulog collections

By taxonomy - Vibrionales
By trascription factor - GntR
By TF family - LacI
By effector - Gluconate
By pathway - Gluconate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -80 Score: 6.5 Sequence: TCATGTTATCGGTAACATGT Position: -66 Score: 5.9 Sequence: ACATGTTACCGGTAACTAAA Locus tag: VIBHAR_00514 Name: gntU Funciton: Low-affinity gluconate transporter Locus tag: VIBHAR_00515 Name: eda Funciton: 2-keto-3-deoxygluconate 6-phosphate aldolase (EC 4.1.2.14)
	VIBHAR_00514	gntU	Low-affinity gluconate transporter
	VIBHAR_00515	eda	2-keto-3-deoxygluconate 6-phosphate aldolase (EC 4.1.2.14)
Position: -106 Score: 5.9 Sequence: TTTAGTTACCGGTAACATGT Position: -92 Score: 6.5 Sequence: ACATGTTACCGATAACATGA Locus tag: VIBHAR_00513 Name: gntK Funciton: Thermoresistant gluconokinase (EC 2.7.1.12) Locus tag: VIBHAR_00512 Name: edd Funciton: 6-phosphogluconate dehydratase (EC 4.2.1.12)
	VIBHAR_00513	gntK	Thermoresistant gluconokinase (EC 2.7.1.12)
	VIBHAR_00512	edd	6-phosphogluconate dehydratase (EC 4.2.1.12)
Position: -38 Score: 5.9 Sequence: TAATGTTACTAGTAACATTA Locus tag: VIBHAR_00507 Name: gntR Funciton: Gluconate utilization transcriptional regulator GntR, LacI family
	VIBHAR_00507	gntR	Gluconate utilization transcriptional regulator GntR, LacI family

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD