Regulon of GntR in Vibrio cholerae O1 biovar eltor str. N16961

Properties
Regulator type:	Transcription factor
TF locus tag:	VC0289
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Gluconate utilization
Effector:	Gluconate
Regulog:	GntR - Vibrionales
Statistics of regulated genes:
- Genes	5
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 33 sites [see more]

Member of regulog collections

By taxonomy - Vibrionales
By trascription factor - GntR
By TF family - LacI
By effector - Gluconate
By pathway - Gluconate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -40 Score: 5.7 Sequence: TAATGTTACTCATAACATTT Locus tag: VC0289 Name: gntR Funciton: Gluconate utilization transcriptional regulator GntR, LacI family
	VC0289	gntR	Gluconate utilization transcriptional regulator GntR, LacI family
Position: -80 Score: 6.2 Sequence: TCATGTTATGGGTAACATGT Position: -66 Score: 6.2 Sequence: ACATGTTACCGGTAACTTCA Locus tag: VC0286 Name: gntU Funciton: Low-affinity gluconate transporter Locus tag: VC0285 Name: eda Funciton: 2-keto-3-deoxygluconate 6-phosphate aldolase (EC 4.1.2.14)
	VC0286	gntU	Low-affinity gluconate transporter
	VC0285	eda	2-keto-3-deoxygluconate 6-phosphate aldolase (EC 4.1.2.14)
Position: -107 Score: 6.2 Sequence: TGAAGTTACCGGTAACATGT Position: -93 Score: 6.2 Sequence: ACATGTTACCCATAACATGA Locus tag: VC0287 Name: gntK Funciton: Thermoresistant gluconokinase (EC 2.7.1.12) Locus tag: VC0288 Name: edd Funciton: 6-phosphogluconate dehydratase (EC 4.2.1.12)
	VC0287	gntK	Thermoresistant gluconokinase (EC 2.7.1.12)
	VC0288	edd	6-phosphogluconate dehydratase (EC 4.2.1.12)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD