Regulon of NifA-1 in Desulfovibrio desulfuricans G20
| Regulator type: | Transcription factor |
| TF locus tag: | Dde_1635 |
| Regulator family: | Fis |
| Regulation mode: | |
| Biological process: | Nitrogen assimilation |
| Effector: | |
| Regulog: | NifA-1 - Desulfovibrionales |
| Statistics of regulated genes: | |
| - Genes | 20 |
| - Operons | 9 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Desulfovibrionales
- By TF family - Fis
- By pathway - Nitrogen assimilation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -192
Score: 4.9 Sequence: TTTACTTTTTTGTAAA
Position: -160
Score: 5.2 Sequence: TTGACATATATGTCAA
Locus tag: Dde_3492
Name: amtB2 Funciton: Ammonium transporter
Locus tag: Dde_3493
Name: glnB2 Funciton: Nitrogen regulatory protein P-II |
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amtB2
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Ammonium transporter
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glnB2
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Nitrogen regulatory protein P-II
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Position: -140
Score: 4 Sequence: TTTGCAAAAATGTGAT
Locus tag: Dde_0104
Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2) |
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glnA
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Glutamine synthetase type I (EC 6.3.1.2)
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Position: -353
Score: 4.7 Sequence: TTGACGTTTATGTCAA
Position: -198
Score: 3.7 Sequence: ATTGCATTTTTCTCAA
Locus tag: Dde_1218
Name: DVU0671 Funciton: Ferredoxin-dependent glutamate synthase |
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DVU0671
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Ferredoxin-dependent glutamate synthase
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Position: -207
Score: 3.7 Sequence: TTAACAAAATTGTGTT
Position: -175
Score: 4.3 Sequence: ATAACAAATATGTATA
Locus tag: Dde_2311
Name: amtB Funciton: Ammonium transporter
Locus tag: Dde_2310
Name: glnB Funciton: Nitrogen regulatory protein P-II
Locus tag: Dde_2309
Name: glnD Funciton: UTP-GlnB uridylyltransferase, GlnD |
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amtB
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Ammonium transporter
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glnB
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Nitrogen regulatory protein P-II
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glnD
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UTP-GlnB uridylyltransferase, GlnD
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Position: -216
Score: 4.1 Sequence: TTAACAAAAAAGTTAA
Position: -174
Score: 4.7 Sequence: TAAACATTTATGTAAA
Locus tag: Dde_0102
Name: glnN Funciton: Glutamine synthetase type III, GlnN (EC 6.3.1.2) |
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glnN
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Glutamine synthetase type III, GlnN (EC 6.3.1.2)
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Position: -253
Score: 5.1 Sequence: TTTACAATTATGTAAC
Position: -59
Score: 3.7 Sequence: TTGACAATTTTGAGCA
Position: 23
Score: 3.5 Sequence: TATTCATAAATGGTAC
Locus tag: Dde_1428
Name: glnQ Funciton: ABC-type polar amino acid transport system, ATPase component
Locus tag: Dde_1429
Name: null Funciton: amino acid ABC transporter, periplasmic amino acid-binding protein
Locus tag: Dde_1430
Name: gltJ Funciton: amino acid ABC transproter, permease protein, His/Glu/Gln/Arg/opine family
Locus tag: Dde_1431
Name: null Funciton: amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family |
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glnQ
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ABC-type polar amino acid transport system, ATPase component
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amino acid ABC transporter, periplasmic amino acid-binding protein
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gltJ
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amino acid ABC transproter, permease protein, His/Glu/Gln/Arg/opine family
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amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family
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Position: -254
Score: 4.9 Sequence: ATTACAAAATTGTAAT
Position: -208
Score: 3.7 Sequence: TTCTCAAAAATATAAA
Position: -46
Score: 4.2 Sequence: TAAACATTTTTGTCAC
Locus tag: Dde_1814
Name: gltB-1 Funciton: Glutamate synthase, large subunit (gltB-1)
Locus tag: Dde_1815
Name: null Funciton: glutamate synthase, amidotransferase subunit, putative
Locus tag: Dde_1816
Name: gltB Funciton: Glutamate synthase, large subunit (gltB) |
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gltB-1
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Glutamate synthase, large subunit (gltB-1)
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glutamate synthase, amidotransferase subunit, putative
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gltB
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Glutamate synthase, large subunit (gltB)
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Position: -139
Score: 4.5 Sequence: ATAACAAATTTGTAAT
Locus tag: Dde_2763
Name: null Funciton: amino acid ABC transporter, ATP-binding protein
Locus tag: Dde_2764
Name: null Funciton: amino acid ABC transporter, amino acid-binding protein
Locus tag: Dde_2765
Name: null Funciton: Glutamine-binding periplasmic protein/glutamine transport system permease protein |
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amino acid ABC transporter, ATP-binding protein
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amino acid ABC transporter, amino acid-binding protein
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Glutamine-binding periplasmic protein/glutamine transport system permease protein
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Position: -99
Score: 4.9 Sequence: TTGACATTTCTGTAAG
Locus tag: Dde_1634
Name: null Funciton: hypothetical protein
Locus tag: Dde_1635
Name: nifA-1 Funciton: transcriptional regulator, NifA subfamily, Fis Family |
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hypothetical protein
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nifA-1
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transcriptional regulator, NifA subfamily, Fis Family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |