Regulon of NifA-1 in Desulfovibrio desulfuricans G20

Properties
Regulator type:	Transcription factor
TF locus tag:	Dde_1635
Regulator family:	Fis
Regulation mode:
Biological process:	Nitrogen assimilation
Effector:
Regulog:	NifA-1 - Desulfovibrionales
Statistics of regulated genes:
- Genes	20
- Operons	9
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 101 sites [see more]

Member of regulog collections

By taxonomy - Desulfovibrionales
By TF family - Fis
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -192 Score: 4.9 Sequence: TTTACTTTTTTGTAAA Position: -160 Score: 5.2 Sequence: TTGACATATATGTCAA Locus tag: Dde_3492 Name: amtB2 Funciton: Ammonium transporter Locus tag: Dde_3493 Name: glnB2 Funciton: Nitrogen regulatory protein P-II
	Dde_3492	amtB2	Ammonium transporter
	Dde_3493	glnB2	Nitrogen regulatory protein P-II
Position: -140 Score: 4 Sequence: TTTGCAAAAATGTGAT Locus tag: Dde_0104 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2)
	Dde_0104	glnA	Glutamine synthetase type I (EC 6.3.1.2)
Position: -353 Score: 4.7 Sequence: TTGACGTTTATGTCAA Position: -198 Score: 3.7 Sequence: ATTGCATTTTTCTCAA Locus tag: Dde_1218 Name: DVU0671 Funciton: Ferredoxin-dependent glutamate synthase
	Dde_1218	DVU0671	Ferredoxin-dependent glutamate synthase
Position: -207 Score: 3.7 Sequence: TTAACAAAATTGTGTT Position: -175 Score: 4.3 Sequence: ATAACAAATATGTATA Locus tag: Dde_2311 Name: amtB Funciton: Ammonium transporter Locus tag: Dde_2310 Name: glnB Funciton: Nitrogen regulatory protein P-II Locus tag: Dde_2309 Name: glnD Funciton: UTP-GlnB uridylyltransferase, GlnD
	Dde_2311	amtB	Ammonium transporter
	Dde_2310	glnB	Nitrogen regulatory protein P-II
	Dde_2309	glnD	UTP-GlnB uridylyltransferase, GlnD
Position: -216 Score: 4.1 Sequence: TTAACAAAAAAGTTAA Position: -174 Score: 4.7 Sequence: TAAACATTTATGTAAA Locus tag: Dde_0102 Name: glnN Funciton: Glutamine synthetase type III, GlnN (EC 6.3.1.2)
	Dde_0102	glnN	Glutamine synthetase type III, GlnN (EC 6.3.1.2)
Position: -253 Score: 5.1 Sequence: TTTACAATTATGTAAC Position: -59 Score: 3.7 Sequence: TTGACAATTTTGAGCA Position: 23 Score: 3.5 Sequence: TATTCATAAATGGTAC Locus tag: Dde_1428 Name: glnQ Funciton: ABC-type polar amino acid transport system, ATPase component Locus tag: Dde_1429 Name: null Funciton: amino acid ABC transporter, periplasmic amino acid-binding protein Locus tag: Dde_1430 Name: gltJ Funciton: amino acid ABC transproter, permease protein, His/Glu/Gln/Arg/opine family Locus tag: Dde_1431 Name: null Funciton: amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family
	Dde_1428	glnQ	ABC-type polar amino acid transport system, ATPase component
	Dde_1429		amino acid ABC transporter, periplasmic amino acid-binding protein
	Dde_1430	gltJ	amino acid ABC transproter, permease protein, His/Glu/Gln/Arg/opine family
	Dde_1431		amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family
Position: -254 Score: 4.9 Sequence: ATTACAAAATTGTAAT Position: -208 Score: 3.7 Sequence: TTCTCAAAAATATAAA Position: -46 Score: 4.2 Sequence: TAAACATTTTTGTCAC Locus tag: Dde_1814 Name: gltB-1 Funciton: Glutamate synthase, large subunit (gltB-1) Locus tag: Dde_1815 Name: null Funciton: glutamate synthase, amidotransferase subunit, putative Locus tag: Dde_1816 Name: gltB Funciton: Glutamate synthase, large subunit (gltB)
	Dde_1814	gltB-1	Glutamate synthase, large subunit (gltB-1)
	Dde_1815		glutamate synthase, amidotransferase subunit, putative
	Dde_1816	gltB	Glutamate synthase, large subunit (gltB)
Position: -139 Score: 4.5 Sequence: ATAACAAATTTGTAAT Locus tag: Dde_2763 Name: null Funciton: amino acid ABC transporter, ATP-binding protein Locus tag: Dde_2764 Name: null Funciton: amino acid ABC transporter, amino acid-binding protein Locus tag: Dde_2765 Name: null Funciton: Glutamine-binding periplasmic protein/glutamine transport system permease protein
	Dde_2763		amino acid ABC transporter, ATP-binding protein
	Dde_2764		amino acid ABC transporter, amino acid-binding protein
	Dde_2765		Glutamine-binding periplasmic protein/glutamine transport system permease protein
Position: -99 Score: 4.9 Sequence: TTGACATTTCTGTAAG Locus tag: Dde_1634 Name: null Funciton: hypothetical protein Locus tag: Dde_1635 Name: nifA-1 Funciton: transcriptional regulator, NifA subfamily, Fis Family
	Dde_1634		hypothetical protein
	Dde_1635	nifA-1	transcriptional regulator, NifA subfamily, Fis Family

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of NifA-1 in Desulfovibrio desulfuricans G20

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --