Regulon of NifA-1 in Desulfomicrobium baculatum DSM 4028
| Regulator type: | Transcription factor |
| TF locus tag: | Dbac_1505 |
| Regulator family: | Fis |
| Regulation mode: | |
| Biological process: | Nitrogen assimilation |
| Effector: | |
| Regulog: | NifA-1 - Desulfovibrionales |
| Statistics of regulated genes: | |
| - Genes | 12 |
| - Operons | 6 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Desulfovibrionales
- By TF family - Fis
- By pathway - Nitrogen assimilation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -89
Score: 4.6 Sequence: TTTCCAATTTTGCAAA
Locus tag: Dbac_2819
Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2) |
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glnA
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Glutamine synthetase type I (EC 6.3.1.2)
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Position: -284
Score: 4.5 Sequence: CTTCCAAAATTGAAAA
Position: -176
Score: 4.7 Sequence: TATACATAAATGTTAA
Position: -64
Score: 3.7 Sequence: TTAACAACTTTGGCAC
Locus tag: Dbac_3049
Name: amtB2 Funciton: Ammonium transporter
Locus tag: Dbac_3050
Name: glnB2 Funciton: Nitrogen regulatory protein P-II |
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amtB2
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Ammonium transporter
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glnB2
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Nitrogen regulatory protein P-II
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Position: -328
Score: 4 Sequence: TTGACATTTATGTGCA
Position: -208
Score: 4.6 Sequence: TTTGCAAATTTGTAAT
Position: -155
Score: 4.5 Sequence: ATTTCAAAAATGTAAT
Locus tag: Dbac_1496
Name: glnN Funciton: Glutamine synthetase type III, GlnN (EC 6.3.1.2) |
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glnN
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Glutamine synthetase type III, GlnN (EC 6.3.1.2)
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Position: -117
Score: 4.4 Sequence: TCTACATTTTTGTCAT
Position: -75
Score: 4.3 Sequence: ATGACATTTCTGTCAT
Locus tag: Dbac_1372
Name: null Funciton: putative glutamate synthase, large subunit (domain 1)
Locus tag: Dbac_1371
Name: null Funciton: glutamate synthase, iron-sulfur cluster-binding subunit, putative
Locus tag: Dbac_1370
Name: null Funciton: glutamate synthase alpha subunit domain protein |
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putative glutamate synthase, large subunit (domain 1)
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glutamate synthase, iron-sulfur cluster-binding subunit, putative
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glutamate synthase alpha subunit domain protein
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Position: -387
Score: 4.5 Sequence: TTTTCAATTTTGGAAG
Locus tag: Dbac_3048
Name: amtB Funciton: Ammonium transporter
Locus tag: Dbac_3047
Name: glnB Funciton: Nitrogen regulatory protein P-II
Locus tag: Dbac_3046
Name: glnD Funciton: UTP-GlnB uridylyltransferase, GlnD |
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amtB
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Ammonium transporter
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glnB
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Nitrogen regulatory protein P-II
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glnD
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UTP-GlnB uridylyltransferase, GlnD
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Position: -38
Score: 5.1 Sequence: TTTACAATAATGGCAA
Locus tag: Dbac_1504
Name: null Funciton: hypothetical protein
Locus tag: Dbac_1505
Name: nifA-1 Funciton: transcriptional regulator, NifA subfamily, Fis Family |
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hypothetical protein
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nifA-1
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transcriptional regulator, NifA subfamily, Fis Family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |