Regulon of Rex in Clostridium tetani E88
| Regulator type: | Transcription factor |
| TF locus tag: | CTC02428 |
| Regulator family: | Rex |
| Regulation mode: | repressor |
| Biological process: | Energy metabolism |
| Effector: | NADH |
| Regulog: | Rex - Clostridia-1 |
| Statistics of regulated genes: | |
| - Genes | 19 |
| - Operons | 11 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Clostridia-1
- By trascription factor - Rex
- By TF family - Rex
- By effector - NADH
- By pathway - Energy metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -39
Score: 5.2 Sequence: TTGACAGATAATTAACAA
Locus tag: CTC00400
Name: PF04143 Funciton: Protein of unknown function DUF395, YeeE/YedE |
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PF04143
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Protein of unknown function DUF395, YeeE/YedE
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Position: -147
Score: 5.4 Sequence: TTGACAAAATATTAACAA
Locus tag: CTC01488
Name: frdA Funciton: Fumarate reductase flavoprotein subunit (EC 1.3.99.1) |
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frdA
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Fumarate reductase flavoprotein subunit (EC 1.3.99.1)
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Position: -84
Score: 5.4 Sequence: CTGTTAATAAATTAACAA
Locus tag: CTC02417
Name: hyd Funciton: Periplasmic [Fe] hydrogenase (EC 1.12.7.2) |
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hyd
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Periplasmic [Fe] hydrogenase (EC 1.12.7.2)
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Position: -157
Score: 4.8 Sequence: AAGTTAAGTTATTAACAA
Position: -50
Score: 5.4 Sequence: ATGTTAAAAATATATCAA
Locus tag: CTC02422
Name: bdh Funciton: NADPH-dependent butanol dehydrogenase (EC 1.1.1.-) / Butyraldehyde dehydrogenase |
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bdh
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NADPH-dependent butanol dehydrogenase (EC 1.1.1.-) / Butyraldehyde dehydrogenase
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Position: -64
Score: 5.1 Sequence: AAGTTAGTTATTTAACAA
Locus tag: CTC00710
Name: bcd Funciton: Butyryl-CoA dehydrogenase (EC 1.3.99.2)
Locus tag: CTC00711
Name: etfB Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: CTC00712
Name: etfA Funciton: Electron transfer flavoprotein, alpha subunit |
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bcd
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Butyryl-CoA dehydrogenase (EC 1.3.99.2)
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etfB
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Electron transfer flavoprotein, beta subunit
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etfA
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Electron transfer flavoprotein, alpha subunit
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Position: -64
Score: 5.3 Sequence: TTGTTAATTTTTTAACTA
Locus tag: CTC00312
Name: thl Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) |
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thl
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3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
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Position: -245
Score: 5 Sequence: TTGTTATAAATTCAACAA
Position: -104
Score: 5.6 Sequence: TTGTTATAATATTAACAA
Locus tag: CTC02427
Name: crt Funciton: 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)
Locus tag: CTC02426
Name: bcd Funciton: Butyryl-CoA dehydrogenase (EC 1.3.99.2)
Locus tag: CTC02425
Name: etfB Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: CTC02424
Name: etfA Funciton: Electron transfer flavoprotein, alpha subunit
Locus tag: CTC02423
Name: hbd Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) |
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crt
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3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)
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bcd
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Butyryl-CoA dehydrogenase (EC 1.3.99.2)
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etfB
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Electron transfer flavoprotein, beta subunit
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etfA
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Electron transfer flavoprotein, alpha subunit
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hbd
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3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
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Position: -48
Score: 4.8 Sequence: TAGTTAAAAAGATATCAA
Locus tag: CTC02546
Name: ptb Funciton: Phosphate butyryltransferase (EC 2.3.1.19)
Locus tag: CTC02545
Name: buk Funciton: Butyrate kinase (EC 2.7.2.7) |
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ptb
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Phosphate butyryltransferase (EC 2.3.1.19)
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buk
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Butyrate kinase (EC 2.7.2.7)
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Position: -141
Score: 5 Sequence: TTGAAAGAAATTTAACAA
Locus tag: CTC01178
Name: noxE Funciton: NADH oxidase (EC 1.6.99.3)
Locus tag: CTC01179
Name: PF04143 Funciton: Protein of unknown function DUF395, YeeE/YedE |
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noxE
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NADH oxidase (EC 1.6.99.3)
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PF04143
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Protein of unknown function DUF395, YeeE/YedE
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Position: -40
Score: 5.5 Sequence: TAGTTAATATTTTAACAA
Locus tag: CTC01847
Name: frdA Funciton: Fumarate reductase flavoprotein subunit (EC 1.3.99.1) |
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frdA
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Fumarate reductase flavoprotein subunit (EC 1.3.99.1)
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Position: -139
Score: 5.5 Sequence: TTGTTATATAATTAACAT
Locus tag: CTC01366
Name: adhE Funciton: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10) |
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adhE
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Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |