Regulon of Rex in Clostridium tetani E88

Properties
Regulator type:	Transcription factor
TF locus tag:	CTC02428
Regulator family:	Rex
Regulation mode:	repressor
Biological process:	Energy metabolism
Effector:	NADH
Regulog:	Rex - Clostridia-1
Statistics of regulated genes:
- Genes	19
- Operons	11
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 83 sites [see more]

Member of regulog collections

By taxonomy - Clostridia-1
By trascription factor - Rex
By TF family - Rex
By effector - NADH
By pathway - Energy metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -39 Score: 5.2 Sequence: TTGACAGATAATTAACAA Locus tag: CTC00400 Name: PF04143 Funciton: Protein of unknown function DUF395, YeeE/YedE
	CTC00400	PF04143	Protein of unknown function DUF395, YeeE/YedE
Position: -147 Score: 5.4 Sequence: TTGACAAAATATTAACAA Locus tag: CTC01488 Name: frdA Funciton: Fumarate reductase flavoprotein subunit (EC 1.3.99.1)
	CTC01488	frdA	Fumarate reductase flavoprotein subunit (EC 1.3.99.1)
Position: -84 Score: 5.4 Sequence: CTGTTAATAAATTAACAA Locus tag: CTC02417 Name: hyd Funciton: Periplasmic [Fe] hydrogenase (EC 1.12.7.2)
	CTC02417	hyd	Periplasmic [Fe] hydrogenase (EC 1.12.7.2)
Position: -157 Score: 4.8 Sequence: AAGTTAAGTTATTAACAA Position: -50 Score: 5.4 Sequence: ATGTTAAAAATATATCAA Locus tag: CTC02422 Name: bdh Funciton: NADPH-dependent butanol dehydrogenase (EC 1.1.1.-) / Butyraldehyde dehydrogenase
	CTC02422	bdh	NADPH-dependent butanol dehydrogenase (EC 1.1.1.-) / Butyraldehyde dehydrogenase
Position: -64 Score: 5.1 Sequence: AAGTTAGTTATTTAACAA Locus tag: CTC00710 Name: bcd Funciton: Butyryl-CoA dehydrogenase (EC 1.3.99.2) Locus tag: CTC00711 Name: etfB Funciton: Electron transfer flavoprotein, beta subunit Locus tag: CTC00712 Name: etfA Funciton: Electron transfer flavoprotein, alpha subunit
	CTC00710	bcd	Butyryl-CoA dehydrogenase (EC 1.3.99.2)
	CTC00711	etfB	Electron transfer flavoprotein, beta subunit
	CTC00712	etfA	Electron transfer flavoprotein, alpha subunit
Position: -64 Score: 5.3 Sequence: TTGTTAATTTTTTAACTA Locus tag: CTC00312 Name: thl Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
	CTC00312	thl	3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Position: -245 Score: 5 Sequence: TTGTTATAAATTCAACAA Position: -104 Score: 5.6 Sequence: TTGTTATAATATTAACAA Locus tag: CTC02427 Name: crt Funciton: 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55) Locus tag: CTC02426 Name: bcd Funciton: Butyryl-CoA dehydrogenase (EC 1.3.99.2) Locus tag: CTC02425 Name: etfB Funciton: Electron transfer flavoprotein, beta subunit Locus tag: CTC02424 Name: etfA Funciton: Electron transfer flavoprotein, alpha subunit Locus tag: CTC02423 Name: hbd Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
	CTC02427	crt	3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)
	CTC02426	bcd	Butyryl-CoA dehydrogenase (EC 1.3.99.2)
	CTC02425	etfB	Electron transfer flavoprotein, beta subunit
	CTC02424	etfA	Electron transfer flavoprotein, alpha subunit
	CTC02423	hbd	3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
Position: -48 Score: 4.8 Sequence: TAGTTAAAAAGATATCAA Locus tag: CTC02546 Name: ptb Funciton: Phosphate butyryltransferase (EC 2.3.1.19) Locus tag: CTC02545 Name: buk Funciton: Butyrate kinase (EC 2.7.2.7)
	CTC02546	ptb	Phosphate butyryltransferase (EC 2.3.1.19)
	CTC02545	buk	Butyrate kinase (EC 2.7.2.7)
Position: -141 Score: 5 Sequence: TTGAAAGAAATTTAACAA Locus tag: CTC01178 Name: noxE Funciton: NADH oxidase (EC 1.6.99.3) Locus tag: CTC01179 Name: PF04143 Funciton: Protein of unknown function DUF395, YeeE/YedE
	CTC01178	noxE	NADH oxidase (EC 1.6.99.3)
	CTC01179	PF04143	Protein of unknown function DUF395, YeeE/YedE
Position: -40 Score: 5.5 Sequence: TAGTTAATATTTTAACAA Locus tag: CTC01847 Name: frdA Funciton: Fumarate reductase flavoprotein subunit (EC 1.3.99.1)
	CTC01847	frdA	Fumarate reductase flavoprotein subunit (EC 1.3.99.1)
Position: -139 Score: 5.5 Sequence: TTGTTATATAATTAACAT Locus tag: CTC01366 Name: adhE Funciton: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)
	CTC01366	adhE	Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of Rex in Clostridium tetani E88

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --