Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Rex in Clostridium tetani E88

Properties
Regulator type: Transcription factor
TF locus tag: CTC02428
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Regulog: Rex - Clostridia-1
Statistics of regulated genes:
- Genes 19
- Operons 11
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 83 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -39
Score: 5.2
Sequence: TTGACAGATAATTAACAA
Locus tag: CTC00400
Name: PF04143
Funciton: Protein of unknown function DUF395, YeeE/YedE
PF04143
Protein of unknown function DUF395, YeeE/YedE

Position: -147
Score: 5.4
Sequence: TTGACAAAATATTAACAA
Locus tag: CTC01488
Name: frdA
Funciton: Fumarate reductase flavoprotein subunit (EC 1.3.99.1)
frdA
Fumarate reductase flavoprotein subunit (EC 1.3.99.1)

Position: -84
Score: 5.4
Sequence: CTGTTAATAAATTAACAA
Locus tag: CTC02417
Name: hyd
Funciton: Periplasmic [Fe] hydrogenase (EC 1.12.7.2)
hyd
Periplasmic [Fe] hydrogenase (EC 1.12.7.2)

Position: -157
Score: 4.8
Sequence: AAGTTAAGTTATTAACAA
Position: -50
Score: 5.4
Sequence: ATGTTAAAAATATATCAA
Locus tag: CTC02422
Name: bdh
Funciton: NADPH-dependent butanol dehydrogenase (EC 1.1.1.-) / Butyraldehyde dehydrogenase
bdh
NADPH-dependent butanol dehydrogenase (EC 1.1.1.-) / Butyraldehyde dehydrogenase

Position: -64
Score: 5.1
Sequence: AAGTTAGTTATTTAACAA
Locus tag: CTC00710
Name: bcd
Funciton: Butyryl-CoA dehydrogenase (EC 1.3.99.2)
Locus tag: CTC00711
Name: etfB
Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: CTC00712
Name: etfA
Funciton: Electron transfer flavoprotein, alpha subunit
bcd
Butyryl-CoA dehydrogenase (EC 1.3.99.2)
etfB
Electron transfer flavoprotein, beta subunit
etfA
Electron transfer flavoprotein, alpha subunit

Position: -64
Score: 5.3
Sequence: TTGTTAATTTTTTAACTA
Locus tag: CTC00312
Name: thl
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
thl
3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)

Position: -245
Score: 5
Sequence: TTGTTATAAATTCAACAA
Position: -104
Score: 5.6
Sequence: TTGTTATAATATTAACAA
Locus tag: CTC02427
Name: crt
Funciton: 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)
Locus tag: CTC02426
Name: bcd
Funciton: Butyryl-CoA dehydrogenase (EC 1.3.99.2)
Locus tag: CTC02425
Name: etfB
Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: CTC02424
Name: etfA
Funciton: Electron transfer flavoprotein, alpha subunit
Locus tag: CTC02423
Name: hbd
Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
crt
3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)
bcd
Butyryl-CoA dehydrogenase (EC 1.3.99.2)
etfB
Electron transfer flavoprotein, beta subunit
etfA
Electron transfer flavoprotein, alpha subunit
hbd
3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)

Position: -48
Score: 4.8
Sequence: TAGTTAAAAAGATATCAA
Locus tag: CTC02546
Name: ptb
Funciton: Phosphate butyryltransferase (EC 2.3.1.19)
Locus tag: CTC02545
Name: buk
Funciton: Butyrate kinase (EC 2.7.2.7)
ptb
Phosphate butyryltransferase (EC 2.3.1.19)
buk
Butyrate kinase (EC 2.7.2.7)

Position: -141
Score: 5
Sequence: TTGAAAGAAATTTAACAA
Locus tag: CTC01178
Name: noxE
Funciton: NADH oxidase (EC 1.6.99.3)
Locus tag: CTC01179
Name: PF04143
Funciton: Protein of unknown function DUF395, YeeE/YedE
noxE
NADH oxidase (EC 1.6.99.3)
PF04143
Protein of unknown function DUF395, YeeE/YedE

Position: -40
Score: 5.5
Sequence: TAGTTAATATTTTAACAA
Locus tag: CTC01847
Name: frdA
Funciton: Fumarate reductase flavoprotein subunit (EC 1.3.99.1)
frdA
Fumarate reductase flavoprotein subunit (EC 1.3.99.1)

Position: -139
Score: 5.5
Sequence: TTGTTATATAATTAACAT
Locus tag: CTC01366
Name: adhE
Funciton: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)
adhE
Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)
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