Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Rex in Clostridium novyi NT

Properties
Regulator type: Transcription factor
TF locus tag: NT01CX_0475
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Regulog: Rex - Clostridia-1
Statistics of regulated genes:
- Genes 22
- Operons 9
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 83 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -198
Score: 5.4
Sequence: TAGATAAATAATTAACAT
Locus tag: NT01CX_0385
Name: pflD
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
Locus tag: NT01CX_0384
Name: pflC
Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
NT01CX_0385
pflD
Pyruvate formate-lyase (EC 2.3.1.54)
NT01CX_0384
pflC
Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
Position: -61
Score: 5.7
Sequence: TTGTTAATAAAATAACAA
Locus tag: NT01CX_0468
Name: bdh
Funciton: NADPH-dependent butanol dehydrogenase (EC 1.1.1.-) / Butyraldehyde dehydrogenase
NT01CX_0468
bdh
NADPH-dependent butanol dehydrogenase (EC 1.1.1.-) / Butyraldehyde dehydrogenase
Position: -90
Score: 5.4
Sequence: ATGACAAAAATTTAACAA
Locus tag: NT01CX_0278
Name: ctfA
Funciton: Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)
Locus tag: NT01CX_0277
Name: ctfB
Funciton: Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9)
NT01CX_0278
ctfA
Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)
NT01CX_0277
ctfB
Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9)
Position: -114
Score: 4.7
Sequence: GTGTTTTTTTTTTAACAA
Locus tag: NT01CX_2324
Name: bcd
Funciton: Butyryl-CoA dehydrogenase (EC 1.3.99.2)
Locus tag: NT01CX_2323
Name: etfB
Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: NT01CX_2322
Name: etfA
Funciton: Electron transfer flavoprotein, alpha subunit
NT01CX_2324
bcd
Butyryl-CoA dehydrogenase (EC 1.3.99.2)
NT01CX_2323
etfB
Electron transfer flavoprotein, beta subunit
NT01CX_2322
etfA
Electron transfer flavoprotein, alpha subunit
Position: -69
Score: 5.2
Sequence: TTGTTACTATATTAACAA
Locus tag: NT01CX_0474
Name: crt
Funciton: 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)
Locus tag: NT01CX_0473
Name: bcd
Funciton: Butyryl-CoA dehydrogenase (EC 1.3.99.2)
Locus tag: NT01CX_0472
Name: etfB
Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: NT01CX_0471
Name: etfA
Funciton: Electron transfer flavoprotein, alpha subunit
Locus tag: NT01CX_0470
Name: hbd
Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
NT01CX_0474
crt
3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)
NT01CX_0473
bcd
Butyryl-CoA dehydrogenase (EC 1.3.99.2)
NT01CX_0472
etfB
Electron transfer flavoprotein, beta subunit
NT01CX_0471
etfA
Electron transfer flavoprotein, alpha subunit
NT01CX_0470
hbd
3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
Position: -233
Score: 5.4
Sequence: ATGATATATATTTAACAA
Position: -46
Score: 5.6
Sequence: AAGTTAAAAAATTAACAA
Locus tag: NT01CX_0604
Name: hbd
Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
Locus tag: NT01CX_0603
Name: thl
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
NT01CX_0604
hbd
3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
NT01CX_0603
thl
3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Position: -97
Score: 5.3
Sequence: ATGTTACATATTTAACAA
Locus tag: NT01CX_0464
Name: hyd
Funciton: Periplasmic [Fe] hydrogenase (EC 1.12.7.2)
NT01CX_0464
hyd
Periplasmic [Fe] hydrogenase (EC 1.12.7.2)
Position: -30
Score: 5
Sequence: TTGAGAGAAATTTAACAA
Locus tag: NT01CX_0309
Name: COG1115
Funciton: Putative amino-acid transport protein
Locus tag: NT01CX_0308
Name: noxE
Funciton: NADH oxidase (EC 1.6.99.3)
Locus tag: NT01CX_0307
Name: PF04143
Funciton: Protein of unknown function DUF395, YeeE/YedE
NT01CX_0309
COG1115
Putative amino-acid transport protein
NT01CX_0308
noxE
NADH oxidase (EC 1.6.99.3)
NT01CX_0307
PF04143
Protein of unknown function DUF395, YeeE/YedE
Position: -70
Score: 5.2
Sequence: TTGAAAAATATATAACAA
Locus tag: NT01CX_1610
Name: etfB
Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: NT01CX_1611
Name: etfA
Funciton: Electron transfer flavoprotein, alpha subunit
Locus tag: NT01CX_1612
Name: glcD
Funciton: Glycolate oxidase (EC 1.1.99.14), FAD/FMN-containing
NT01CX_1610
etfB
Electron transfer flavoprotein, beta subunit
NT01CX_1611
etfA
Electron transfer flavoprotein, alpha subunit
NT01CX_1612
glcD
Glycolate oxidase (EC 1.1.99.14), FAD/FMN-containing
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