Regulon of Rex in Clostridium novyi NT
| Regulator type: | Transcription factor |
| TF locus tag: | NT01CX_0475 |
| Regulator family: | Rex |
| Regulation mode: | repressor |
| Biological process: | Energy metabolism |
| Effector: | NADH |
| Regulog: | Rex - Clostridia-1 |
| Statistics of regulated genes: | |
| - Genes | 22 |
| - Operons | 9 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Clostridia-1
- By trascription factor - Rex
- By TF family - Rex
- By effector - NADH
- By pathway - Energy metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -198
Score: 5.4 Sequence: TAGATAAATAATTAACAT
Locus tag: NT01CX_0385
Name: pflD Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
Locus tag: NT01CX_0384
Name: pflC Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
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pflD
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Pyruvate formate-lyase (EC 2.3.1.54)
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pflC
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Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
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Position: -61
Score: 5.7 Sequence: TTGTTAATAAAATAACAA
Locus tag: NT01CX_0468
Name: bdh Funciton: NADPH-dependent butanol dehydrogenase (EC 1.1.1.-) / Butyraldehyde dehydrogenase |
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bdh
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NADPH-dependent butanol dehydrogenase (EC 1.1.1.-) / Butyraldehyde dehydrogenase
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Position: -90
Score: 5.4 Sequence: ATGACAAAAATTTAACAA
Locus tag: NT01CX_0278
Name: ctfA Funciton: Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)
Locus tag: NT01CX_0277
Name: ctfB Funciton: Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9) |
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ctfA
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Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9)
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ctfB
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Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9)
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Position: -114
Score: 4.7 Sequence: GTGTTTTTTTTTTAACAA
Locus tag: NT01CX_2324
Name: bcd Funciton: Butyryl-CoA dehydrogenase (EC 1.3.99.2)
Locus tag: NT01CX_2323
Name: etfB Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: NT01CX_2322
Name: etfA Funciton: Electron transfer flavoprotein, alpha subunit |
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bcd
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Butyryl-CoA dehydrogenase (EC 1.3.99.2)
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etfB
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Electron transfer flavoprotein, beta subunit
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etfA
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Electron transfer flavoprotein, alpha subunit
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Position: -69
Score: 5.2 Sequence: TTGTTACTATATTAACAA
Locus tag: NT01CX_0474
Name: crt Funciton: 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)
Locus tag: NT01CX_0473
Name: bcd Funciton: Butyryl-CoA dehydrogenase (EC 1.3.99.2)
Locus tag: NT01CX_0472
Name: etfB Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: NT01CX_0471
Name: etfA Funciton: Electron transfer flavoprotein, alpha subunit
Locus tag: NT01CX_0470
Name: hbd Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) |
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crt
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3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)
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bcd
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Butyryl-CoA dehydrogenase (EC 1.3.99.2)
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etfB
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Electron transfer flavoprotein, beta subunit
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etfA
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Electron transfer flavoprotein, alpha subunit
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hbd
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3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
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Position: -233
Score: 5.4 Sequence: ATGATATATATTTAACAA
Position: -46
Score: 5.6 Sequence: AAGTTAAAAAATTAACAA
Locus tag: NT01CX_0604
Name: hbd Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
Locus tag: NT01CX_0603
Name: thl Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) |
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hbd
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3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
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thl
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3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
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Position: -97
Score: 5.3 Sequence: ATGTTACATATTTAACAA
Locus tag: NT01CX_0464
Name: hyd Funciton: Periplasmic [Fe] hydrogenase (EC 1.12.7.2) |
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hyd
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Periplasmic [Fe] hydrogenase (EC 1.12.7.2)
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Position: -30
Score: 5 Sequence: TTGAGAGAAATTTAACAA
Locus tag: NT01CX_0309
Name: COG1115 Funciton: Putative amino-acid transport protein
Locus tag: NT01CX_0308
Name: noxE Funciton: NADH oxidase (EC 1.6.99.3)
Locus tag: NT01CX_0307
Name: PF04143 Funciton: Protein of unknown function DUF395, YeeE/YedE |
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COG1115
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Putative amino-acid transport protein
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noxE
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NADH oxidase (EC 1.6.99.3)
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PF04143
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Protein of unknown function DUF395, YeeE/YedE
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Position: -70
Score: 5.2 Sequence: TTGAAAAATATATAACAA
Locus tag: NT01CX_1610
Name: etfB Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: NT01CX_1611
Name: etfA Funciton: Electron transfer flavoprotein, alpha subunit
Locus tag: NT01CX_1612
Name: glcD Funciton: Glycolate oxidase (EC 1.1.99.14), FAD/FMN-containing |
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etfB
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Electron transfer flavoprotein, beta subunit
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etfA
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Electron transfer flavoprotein, alpha subunit
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glcD
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Glycolate oxidase (EC 1.1.99.14), FAD/FMN-containing
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |