Regulon of Rex in Clostridium butyricum 5521
| Regulator type: | Transcription factor |
| TF locus tag: | CBY_3040 |
| Regulator family: | Rex |
| Regulation mode: | repressor |
| Biological process: | Energy metabolism |
| Effector: | NADH |
| Regulog: | Rex - Clostridia-1 |
| Statistics of regulated genes: | |
| - Genes | 20 |
| - Operons | 11 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Clostridia-1
- By trascription factor - Rex
- By TF family - Rex
- By effector - NADH
- By pathway - Energy metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -198
Score: 5.3 Sequence: CTGTTAAAAAAATAACAA
Locus tag: CBY_3016
Name: etfB Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: CBY_3017
Name: etfA Funciton: Electron transfer flavoprotein, alpha subunit
Locus tag: CBY_3018
Name: glcD Funciton: Glycolate oxidase (EC 1.1.99.14), FAD/FMN-containing |
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etfB
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Electron transfer flavoprotein, beta subunit
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etfA
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Electron transfer flavoprotein, alpha subunit
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glcD
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Glycolate oxidase (EC 1.1.99.14), FAD/FMN-containing
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Position: -41
Score: 5.3 Sequence: ATGTGAATTAATTAACAA
Locus tag: CBY_2472
Name: butA Funciton: 2,3-butanediol dehydrogenase (EC 1.1.1.4) |
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butA
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2,3-butanediol dehydrogenase (EC 1.1.1.4)
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Position: -92
Score: 5.4 Sequence: TTGACAAAAAAATAACAA
Locus tag: CBY_3747
Name: bdh Funciton: NADPH-dependent butanol dehydrogenase (EC 1.1.1.-) / Butyraldehyde dehydrogenase |
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bdh
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NADPH-dependent butanol dehydrogenase (EC 1.1.1.-) / Butyraldehyde dehydrogenase
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Position: -145
Score: 5.4 Sequence: TTGTTAAAAAAGTAACAA
Locus tag: CBY_2357
Name: maeB Funciton: NAD-dependent malic enzyme (EC 1.1.1.38) |
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maeB
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NAD-dependent malic enzyme (EC 1.1.1.38)
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Position: -122
Score: 5 Sequence: ATGATAAAAATATTACAA
Locus tag: CBY_3751
Name: bdh Funciton: NADPH-dependent butanol dehydrogenase (EC 1.1.1.-) / Butyraldehyde dehydrogenase |
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bdh
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NADPH-dependent butanol dehydrogenase (EC 1.1.1.-) / Butyraldehyde dehydrogenase
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Position: -140
Score: 5.3 Sequence: TTGTCTAAAATTTAACAA
Position: -81
Score: 5.4 Sequence: ATGTTAATAATTTAACGA
Locus tag: CBY_1290
Name: thlA Funciton: Acetyl-CoA acetyltransferase (EC 2.3.1.9) |
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thlA
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Acetyl-CoA acetyltransferase (EC 2.3.1.9)
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Position: -55
Score: 5.4 Sequence: TTGATATAATTTTAACAA
Locus tag: CBY_2919
Name: ptb Funciton: Phosphate butyryltransferase (EC 2.3.1.19)
Locus tag: CBY_2920
Name: buk Funciton: Butyrate kinase (EC 2.7.2.7) |
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ptb
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Phosphate butyryltransferase (EC 2.3.1.19)
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buk
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Butyrate kinase (EC 2.7.2.7)
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Position: -98
Score: 5.6 Sequence: TTGTTATAATATTAACAA
Locus tag: CBY_3041
Name: crt Funciton: 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)
Locus tag: CBY_3042
Name: bcd Funciton: Butyryl-CoA dehydrogenase (EC 1.3.99.2)
Locus tag: CBY_3043
Name: etfB Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: CBY_3044
Name: etfA Funciton: Electron transfer flavoprotein, alpha subunit
Locus tag: CBY_3045
Name: hbd Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) |
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crt
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3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)
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bcd
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Butyryl-CoA dehydrogenase (EC 1.3.99.2)
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etfB
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Electron transfer flavoprotein, beta subunit
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etfA
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Electron transfer flavoprotein, alpha subunit
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hbd
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3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
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Position: -146
Score: 5 Sequence: TTGACAAAAAATAAACAA
Position: -104
Score: 5.5 Sequence: GTGTTAAAAAAATAACAA
Locus tag: CBY_3753
Name: adhE Funciton: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10) |
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adhE
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Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)
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Position: -169
Score: 5.2 Sequence: TTATTAATTTTTTAACAA
Position: -148
Score: 5.1 Sequence: TTGTTAAAAAAAGAACAA
Locus tag: CBY_3325
Name: narA Funciton: Nitrate reductase, catalytic subunit
Locus tag: CBY_3326
Name: narB Funciton: Nitrate reductase, electron transfer subunit |
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narA
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Nitrate reductase, catalytic subunit
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narB
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Nitrate reductase, electron transfer subunit
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Position: -37
Score: 5.5 Sequence: AAGTTAATTATTTAACAA
Locus tag: CBY_3643
Name: fld Funciton: Flavodoxin
Locus tag: CBY_3642
Name: por Funciton: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) |
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fld
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Flavodoxin
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por
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Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |