Regulon of Rex in Clostridium botulinum A str. ATCC 3502
| Regulator type: | Transcription factor |
| TF locus tag: | CBO3306 |
| Regulator family: | Rex |
| Regulation mode: | repressor |
| Biological process: | Energy metabolism |
| Effector: | NADH |
| Regulog: | Rex - Clostridia-1 |
| Statistics of regulated genes: | |
| - Genes | 15 |
| - Operons | 8 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Clostridia-1
- By trascription factor - Rex
- By TF family - Rex
- By effector - NADH
- By pathway - Energy metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -51
Score: 5.5 Sequence: ATGTTAATTAATTAACAT
Locus tag: CBO2217
Name: butA Funciton: 2,3-butanediol dehydrogenase (EC 1.1.1.4) |
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butA
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2,3-butanediol dehydrogenase (EC 1.1.1.4)
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Position: -261
Score: 4.8 Sequence: TAGTTATTATTTTATCAT
Locus tag: CBO1643
Name: bdh Funciton: NADPH-dependent butanol dehydrogenase (EC 1.1.1.-) / Butyraldehyde dehydrogenase |
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bdh
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NADPH-dependent butanol dehydrogenase (EC 1.1.1.-) / Butyraldehyde dehydrogenase
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Position: -136
Score: 5 Sequence: TAGATAAATTTTTATCAT
Position: -93
Score: 4.8 Sequence: TTGTTAAAATAATAGCTA
Locus tag: CBO3202
Name: crt Funciton: 3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)
Locus tag: CBO3201
Name: hbd Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
Locus tag: CBO3200
Name: thl Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Locus tag: CBO3199
Name: bcd Funciton: Butyryl-CoA dehydrogenase (EC 1.3.99.2)
Locus tag: CBO3198
Name: etfB Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: CBO3197
Name: etfA Funciton: Electron transfer flavoprotein, alpha subunit |
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crt
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3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55)
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hbd
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3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
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thl
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3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
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bcd
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Butyryl-CoA dehydrogenase (EC 1.3.99.2)
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etfB
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Electron transfer flavoprotein, beta subunit
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etfA
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Electron transfer flavoprotein, alpha subunit
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Position: -236
Score: 5 Sequence: TTGTTAAAAAATTATTAA
Position: -87
Score: 5.4 Sequence: TTGTTAAAAAAATAACTA
Locus tag: CBO1438
Name: adhA Funciton: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent |
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adhA
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Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent
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Position: -178
Score: 5.7 Sequence: ATGATAAATATTTAACAA
Position: -121
Score: 5.8 Sequence: TTGTTAAATAAATAACAA
Locus tag: CBO0345
Name: adhE Funciton: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10) |
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adhE
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Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)
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Position: -144
Score: 5 Sequence: TTGAGAGAAAATTAACAA
Locus tag: CBO1579
Name: COG1115 Funciton: Putative amino-acid transport protein
Locus tag: CBO1580
Name: noxE Funciton: NADH oxidase (EC 1.6.99.3)
Locus tag: CBO1581
Name: PF04143 Funciton: Protein of unknown function DUF395, YeeE/YedE |
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COG1115
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Putative amino-acid transport protein
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noxE
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NADH oxidase (EC 1.6.99.3)
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PF04143
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Protein of unknown function DUF395, YeeE/YedE
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Position: -161
Score: 5.3 Sequence: ATGTTAATTAATTAACTA
Locus tag: CBO1519
Name: ldh Funciton: L-lactate dehydrogenase (EC 1.1.1.27) |
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ldh
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L-lactate dehydrogenase (EC 1.1.1.27)
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Position: -145
Score: 5.7 Sequence: TTGTTAATAATATAACAA
Locus tag: CBO0246
Name: maeB Funciton: NAD-dependent malic enzyme (EC 1.1.1.38) |
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maeB
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NAD-dependent malic enzyme (EC 1.1.1.38)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |