Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of PaaR in Ralstonia solanacearum GMI1000

Properties
Regulator type: Transcription factor
TF locus tag: RS03754
Regulator family: TetR
Regulation mode: repressor
Biological process: Phenylacetic acid degradation
Effector: Phenylacetyl-CoA
Regulog: PaaR - Ralstonia
Statistics of regulated genes:
- Genes 9
- Operons 3
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 18 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -48
Score: 6.2
Sequence: GCCGACCAACCGGTCGGTTAAT
Locus tag: RSc2873
Name: paaF
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: RSc2874
Name: paaY
Funciton: thioesterase superfamily protein
Locus tag: RSc2875
Name: paaK
Funciton: Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
paaF
Enoyl-CoA hydratase (EC 4.2.1.17)
paaY
thioesterase superfamily protein
paaK
Phenylacetate-coenzyme A ligase (EC 6.2.1.30)

Position: -97
Score: 6.3
Sequence: ATTGACCGACCGGTCGGACGAT
Locus tag: RSp0604
Name: paaA
Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: RSp0605
Name: paaB
Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: RSp0606
Name: paaC
Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: RSp0607
Name: paaD
Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: RSp0608
Name: paaE
Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
paaA
Phenylacetate-CoA oxygenase, PaaA subunit
paaB
Phenylacetate-CoA oxygenase, PaaB subunit
paaC
Phenylacetate-CoA oxygenase, PaaC subunit
paaD
Phenylacetate-CoA oxygenase, PaaD subunit
paaE
Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)

Position: -53
Score: 6.5
Sequence: ATTAACCGACCGGTTGGTCGGC
Locus tag: RSc2872
Name: paaF2
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
paaF2
Enoyl-CoA hydratase (EC 4.2.1.17)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD