Regulon of PaaR in Ralstonia solanacearum GMI1000
| Regulator type: | Transcription factor |
| TF locus tag: | RS03754 |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Phenylacetic acid degradation |
| Effector: | Phenylacetyl-CoA |
| Regulog: | PaaR - Ralstonia |
| Statistics of regulated genes: | |
| - Genes | 9 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Ralstonia
- By trascription factor - PaaR
- By TF family - TetR
- By effector - Phenylacetyl-CoA
- By pathway - Phenylacetic acid degradation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -48
Score: 6.2 Sequence: GCCGACCAACCGGTCGGTTAAT
Locus tag: RSc2873
Name: paaF Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Locus tag: RSc2874
Name: paaY Funciton: thioesterase superfamily protein
Locus tag: RSc2875
Name: paaK Funciton: Phenylacetate-coenzyme A ligase (EC 6.2.1.30) |
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paaF
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Enoyl-CoA hydratase (EC 4.2.1.17)
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paaY
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thioesterase superfamily protein
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paaK
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Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
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Position: -97
Score: 6.3 Sequence: ATTGACCGACCGGTCGGACGAT
Locus tag: RSp0604
Name: paaA Funciton: Phenylacetate-CoA oxygenase, PaaA subunit
Locus tag: RSp0605
Name: paaB Funciton: Phenylacetate-CoA oxygenase, PaaB subunit
Locus tag: RSp0606
Name: paaC Funciton: Phenylacetate-CoA oxygenase, PaaC subunit
Locus tag: RSp0607
Name: paaD Funciton: Phenylacetate-CoA oxygenase, PaaD subunit
Locus tag: RSp0608
Name: paaE Funciton: Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-) |
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paaA
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Phenylacetate-CoA oxygenase, PaaA subunit
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paaB
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Phenylacetate-CoA oxygenase, PaaB subunit
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paaC
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Phenylacetate-CoA oxygenase, PaaC subunit
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paaD
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Phenylacetate-CoA oxygenase, PaaD subunit
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paaE
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Probable phenylacetic acid degradation NADH oxidoreductase paaE (EC 1.-.-.-)
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Position: -53
Score: 6.5 Sequence: ATTAACCGACCGGTTGGTCGGC
Locus tag: RSc2872
Name: paaF2 Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) |
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paaF2
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Enoyl-CoA hydratase (EC 4.2.1.17)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |