Regulon of PaaR in Thermus thermophilus HB27

Properties
Regulator type:	Transcription factor
TF locus tag:	TTC0609
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Phenylacetic acid degradation
Effector:	Phenylacetyl-CoA
Regulog:	PaaR - Deinococcus-Thermus
Statistics of regulated genes:
- Genes	13
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 4 sites [see more]

Member of regulog collections

By trascription factor - PaaR
By taxonomy - Deinococcus-Thermus
By TF family - TetR
By effector - Phenylacetyl-CoA
By pathway - Phenylacetic acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -61 Score: 4.9 Sequence: CGAACGGCCGTTAGTTTG Locus tag: TTC0597 Name: livK Funciton: Putative branched-chain amino acid ABC transporter, substrate-binding component Locus tag: TTC0598 Name: livH Funciton: Putative branched-chain amino acid ABC transporter, permease component Locus tag: TTC0599 Name: livF Funciton: Putative branched-chain amino acid ABC transporter, permease component 2 Locus tag: TTC0600 Name: livM Funciton: Putative branched-chain amino acid ABC transporter, ATPase component Locus tag: TTC0601 Name: paaI Funciton: Phenylacetic acid degradation protein PaaI, thioesterase Locus tag: TTC0602 Name: paaK Funciton: Phenylacetate-coenzyme A ligase (EC 6.2.1.30) Locus tag: TTC0603 Name: paaY Funciton: thioesterase superfamily protein
	TTC0597	livK	Putative branched-chain amino acid ABC transporter, substrate-binding component
	TTC0598	livH	Putative branched-chain amino acid ABC transporter, permease component
	TTC0599	livF	Putative branched-chain amino acid ABC transporter, permease component 2
	TTC0600	livM	Putative branched-chain amino acid ABC transporter, ATPase component
	TTC0601	paaI	Phenylacetic acid degradation protein PaaI, thioesterase
	TTC0602	paaK	Phenylacetate-coenzyme A ligase (EC 6.2.1.30)
	TTC0603	paaY	thioesterase superfamily protein
Position: -20 Score: 6.1 Sequence: CTAACAAACGACCGTTAG Locus tag: TTC0609 Name: paaR Funciton: Transcriptional regulator of phenylacetic acid degradation, TetR family Locus tag: TTC0608 Name: paaA Funciton: Phenylacetate-CoA oxygenase, PaaA subunit Locus tag: TTC0607 Name: paaB Funciton: Phenylacetate-CoA oxygenase, PaaB subunit Locus tag: TTC0606 Name: paaC Funciton: Phenylacetate-CoA oxygenase, PaaC subunit Locus tag: TTC0605 Name: paaD Funciton: Phenylacetate-CoA oxygenase, PaaD subunit Locus tag: TTC0604 Name: paaZ Funciton: Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ
	TTC0609	paaR	Transcriptional regulator of phenylacetic acid degradation, TetR family
	TTC0608	paaA	Phenylacetate-CoA oxygenase, PaaA subunit
	TTC0607	paaB	Phenylacetate-CoA oxygenase, PaaB subunit
	TTC0606	paaC	Phenylacetate-CoA oxygenase, PaaC subunit
	TTC0605	paaD	Phenylacetate-CoA oxygenase, PaaD subunit
	TTC0604	paaZ	Aldehyde dehydrogenase (EC 1.2.1.3), PaaZ

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD