Regulon of PhnR in Vibrio angustum S14
| Regulator type: | Transcription factor |
| TF locus tag: | VAS14_10969 |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Phosphonate utilization; 2-aminoethylphosphonate utilization |
| Effector: | |
| Regulog: | PhnR - Vibrionales |
| Statistics of regulated genes: | |
| - Genes | 8 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - PhnR
- By taxonomy - Vibrionales
- By TF family - GntR/Others
- By pathway - Phosphonate utilization
- By pathway - 2-aminoethylphosphonate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -35
Score: 5 Sequence: TTAGTGGTCTATACCAATTA
Locus tag: VAS14_11029
Name: null Funciton: Glycine/D-amino acid oxidase |
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Glycine/D-amino acid oxidase
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Position: -35
Score: 6 Sequence: AATTTGGTATATACCAATTA
Locus tag: VAS14_10979
Name: phnT Funciton: 2-aminoethylphosphonate ABC transporter, ATP-binding protein (TC 3.A.1.9.1)
Locus tag: VAS14_10974
Name: phnU Funciton: 2-aminoethylphosphonate ABC transporter, permease protein I (TC 3.A.1.9.
Locus tag: VAS14_10969
Name: phnR Funciton: 2-aminoethylphosphonate utilization regulator, GntR family |
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phnT
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2-aminoethylphosphonate ABC transporter, ATP-binding protein (TC 3.A.1.9.1)
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phnU
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2-aminoethylphosphonate ABC transporter, permease protein I (TC 3.A.1.9.
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phnR
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2-aminoethylphosphonate utilization regulator, GntR family
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Position: -231
Score: 5.7 Sequence: ATTTTGGTATGTACCAGTTT
Position: -30
Score: 5.4 Sequence: AAACTGGTATAGTCCAAATG
Locus tag: VAS14_11014
Name: phnW Funciton: 2-aminoethylphosphonate:pyruvate aminotransferase (EC 2.6.1.37)
Locus tag: VAS14_11019
Name: COG0160 Funciton: 4-aminobutyrate aminotransferase and related aminotransferases
Locus tag: VAS14_11024
Name: phnX Funciton: 2-phosphonoacetaldehyde hydrolase (EC 3.11.1.1) |
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phnW
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2-aminoethylphosphonate:pyruvate aminotransferase (EC 2.6.1.37)
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COG0160
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4-aminobutyrate aminotransferase and related aminotransferases
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phnX
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2-phosphonoacetaldehyde hydrolase (EC 3.11.1.1)
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Position: -62
Score: 5.7 Sequence: AAACTGGTACATACCAAAAT
Locus tag: VAS14_11009
Name: phnS Funciton: 2-aminoethylphosphonate ABC transporter, periplasmic binding component (TC 3.A.1.9.1) |
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phnS
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2-aminoethylphosphonate ABC transporter, periplasmic binding component (TC 3.A.1.9.1)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |