Profile of regulator PhnR in Vibrionales
Properties
| Regulator family: |
GntR/Others |
| Regulation mode: |
repressor |
| Biological process: |
Phosphonate utilization; 2-aminoethylphosphonate utilization |
| Effector: |
|
| Regulog: |
PhnR - Vibrionales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Vibrio cholerae O1 biovar eltor str. N16961
|
|
VCA0604 |
phnW |
-28 |
5.2 |
TTATTGGTATAGTCCAAAAA |
|
VCA0602 |
phnT |
6 |
5.7 |
ATTTTGGACTATACCAAATT |
|
VCA0603 |
phnS |
-27 |
5.7 |
ATTCTGGTACATACCAAATT |
|
VCA0604 |
phnW |
-224 |
5.7 |
AATTTGGTATGTACCAGAAT |
|
VCA0603 |
phnS |
-223 |
5.2 |
TTTTTGGACTATACCAATAA |
|
Vibrio vulnificus CMCP6
|
|
VV21664 |
phnW |
-228 |
5.4 |
ATTTTGGTCTGTACCAGTTG |
|
VV21664 |
phnW |
-30 |
5 |
TTTCTGGTGTAGACCAATTA |
|
VV21665 |
phnS |
-48 |
5.4 |
CAACTGGTACAGACCAAAAT |
|
VV21665 |
phnS |
-246 |
5 |
TAATTGGTCTACACCAGAAA |
|
VV21669 |
phnT |
-31 |
5.9 |
AATTTGGTATATACCATTTG |
|
Vibrio harveyi ATCC BAA-1116
|
|
VIBHAR_04876 |
phnW |
-139 |
5.4 |
AATTTGGTCTGTACCAGTTG |
|
VIBHAR_04877 |
phnS |
-47 |
5.4 |
CAACTGGTACAGACCAAATT |
|
VIBHAR_04876 |
phnW |
57 |
5.7 |
AATTTGGTATATACCAACAA |
|
VIBHAR_04880 |
phnT |
-31 |
5.6 |
AAGTTGGTATATACCATTTG |
|
VIBHAR_04877 |
phnS |
-243 |
5.7 |
TTGTTGGTATATACCAAATT |
|
Vibrio parahaemolyticus RIMD 2210633
|
|
VPA0355 |
phnR2 |
-18 |
3.6 |
CTATTGGACTAGGTCAGAAT |
|
VPA0235 |
phnW |
-42 |
5 |
TTTCTGGTGTAGACCAATTA |
|
VPA0236 |
phnS |
-246 |
5 |
TAATTGGTCTACACCAGAAA |
|
VPA0236 |
phnS |
-48 |
5.4 |
CAACTGGTACAGACCAAAAT |
|
VPA0238 |
phnT |
-31 |
5.6 |
AAGTTGGTATATACCATTTG |
|
VPA0354 |
phnS2 |
-211 |
4.2 |
ATTCTGACCTAGTCCAATAG |
|
VPA0354 |
phnS2 |
-30 |
3.8 |
TTACTGACCTAGTCCAGAAG |
|
VPA0235 |
phnW |
-240 |
5.4 |
ATTTTGGTCTGTACCAGTTG |
|
Vibrio shilonii AK1
|
|
VSAK1_19534 |
phnR2 |
-123 |
3.5 |
CCTCTGGACTAGGTCAGTAA |
|
VSAK1_17767 |
phnW |
-209 |
5 |
GATTTGGTCTGTACCAGTTT |
|
VSAK1_17767 |
phnW |
-30 |
5.5 |
AAATTGGTATAGTCCAAATA |
|
VSAK1_17762 |
phnS |
-35 |
5 |
AAACTGGTACAGACCAAATC |
|
VSAK1_17762 |
phnS |
-214 |
5.5 |
TATTTGGACTATACCAATTT |
|
VSAK1_17757 |
phnT |
-31 |
5.9 |
AATTTGGTATATACCATTTG |
|
VSAK1_17757 |
phnT |
-53 |
4.7 |
CCAATGAAATATACCAGATT |
|
VSAK1_19529 |
phnS2 |
-30 |
3.5 |
TTACTGACCTAGTCCAGAGG |
|
Vibrio splendidus LGP32
|
|
VS_II0399 |
phnS |
-380 |
5.4 |
ATTTTGGACTATACCAGTAT |
|
VS_II0399 |
phnS |
-192 |
5.3 |
CATCTGGTACATACCAATGT |
|
VS_II0401 |
phnT |
-34 |
5.5 |
AATTTGGTATATACCATGTA |
|
VS_II0398 |
phnW |
-34 |
5.4 |
ATACTGGTATAGTCCAAAAT |
|
VS_II0398 |
phnW |
-222 |
5.3 |
ACATTGGTATGTACCAGATG |
|
Vibrio fischeri ES114
|
|
VF_A1087 |
phnS2 |
-31 |
4.7 |
TTATTGATGTAGTCCAAAAG |
|
Vibrio salmonicida LFI1238
|
|
VSAL_II0810 |
phnT |
-31 |
5.4 |
TATTTGGAGTATACCAAATG |
|
VSAL_II0811 |
phnS |
15 |
5.4 |
TTAATGGTACATACCAATTT |
|
VSAL_II0811 |
phnS |
-172 |
5.6 |
ATTTTGGTATATATCAGTTT |
|
VSAL_II0812 |
phnW |
-18 |
5.6 |
AAACTGATATATACCAAAAT |
|
VSAL_II0812 |
phnW |
-205 |
5.4 |
AAATTGGTATGTACCATTAA |
|
VSAL_II1027 |
phnS2 |
-31 |
4.7 |
TTATTGATGTAGTCCAAAAG |
|
Vibrio angustum S14
|
|
VAS14_11014 |
phnW |
-30 |
5.4 |
AAACTGGTATAGTCCAAATG |
|
VAS14_11029 |
null |
-35 |
5 |
TTAGTGGTCTATACCAATTA |
|
VAS14_10979 |
phnT |
-35 |
6 |
AATTTGGTATATACCAATTA |
|
VAS14_11014 |
phnW |
-231 |
5.7 |
ATTTTGGTATGTACCAGTTT |
|
VAS14_11009 |
phnS |
-62 |
5.7 |
AAACTGGTACATACCAAAAT |
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Regulatory Sites
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