Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of PhnR in Vibrio harveyi ATCC BAA-1116

Properties
Regulator type: Transcription factor
TF locus tag: VIBHAR_04882
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Phosphonate utilization; 2-aminoethylphosphonate utilization
Effector:
Regulog: PhnR - Vibrionales
Statistics of regulated genes:
- Genes 8
- Operons 3
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 48 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -139
Score: 5.4
Sequence: AATTTGGTCTGTACCAGTTG
Position: 57
Score: 5.7
Sequence: AATTTGGTATATACCAACAA
Locus tag: VIBHAR_04876
Name: phnW
Funciton: 2-aminoethylphosphonate:pyruvate aminotransferase (EC 2.6.1.37)
Locus tag: VIBHAR_04875
Name: COG0160
Funciton: 4-aminobutyrate aminotransferase and related aminotransferases
Locus tag: VIBHAR_04874
Name: phnX
Funciton: 2-phosphonoacetaldehyde hydrolase (EC 3.11.1.1)
phnW
2-aminoethylphosphonate:pyruvate aminotransferase (EC 2.6.1.37)
COG0160
4-aminobutyrate aminotransferase and related aminotransferases
phnX
2-phosphonoacetaldehyde hydrolase (EC 3.11.1.1)

Position: -243
Score: 5.7
Sequence: TTGTTGGTATATACCAAATT
Position: -47
Score: 5.4
Sequence: CAACTGGTACAGACCAAATT
Locus tag: VIBHAR_04877
Name: phnS
Funciton: 2-aminoethylphosphonate ABC transporter, periplasmic binding component (TC 3.A.1.9.1)
phnS
2-aminoethylphosphonate ABC transporter, periplasmic binding component (TC 3.A.1.9.1)

Position: -31
Score: 5.6
Sequence: AAGTTGGTATATACCATTTG
Locus tag: VIBHAR_04880
Name: phnT
Funciton: 2-aminoethylphosphonate ABC transporter, ATP-binding protein (TC 3.A.1.9.1)
Locus tag: VIBHAR_04881
Name: phnU
Funciton: 2-aminoethylphosphonate ABC transporter, permease protein I (TC 3.A.1.9.
Locus tag: VIBHAR_04882
Name: phnR
Funciton: 2-aminoethylphosphonate utilization regulator, GntR family
Locus tag: VIBHAR_04883
Name: VCA0599
Funciton: Permease of the drug/metabolite transporter (DMT) superfamily
phnT
2-aminoethylphosphonate ABC transporter, ATP-binding protein (TC 3.A.1.9.1)
phnU
2-aminoethylphosphonate ABC transporter, permease protein I (TC 3.A.1.9.
phnR
2-aminoethylphosphonate utilization regulator, GntR family
VCA0599
Permease of the drug/metabolite transporter (DMT) superfamily
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD