Regulon of PhnF in Methylibium petroleiphilum PM1
| Regulator type: | Transcription factor |
| TF locus tag: | Mpe_B0420, Mpe_B0456 |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Phosphonate utilization |
| Effector: | |
| Regulog: | PhnF - Comamonadaceae |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - PhnF
- By taxonomy - Comamonadaceae
- By TF family - GntR/Others
- By pathway - Phosphonate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -28
Score: 4.4 Sequence: CCCAGATATCTAGACATCTGGA
Locus tag: Mpe_B0456
Name: phnF Funciton: phophonate C-P lyase system transcriptional regulator PhnF, GntR family
Locus tag: Mpe_B0457
Name: phnD Funciton: Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)
Locus tag: Mpe_B0458
Name: phnC Funciton: Phosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1) |
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phnF
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phophonate C-P lyase system transcriptional regulator PhnF, GntR family
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phnD
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Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)
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phnC
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Phosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1)
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Position: -28
Score: 4.4 Sequence: CCCAGATATCTAGACATCTGGA
Locus tag: Mpe_B0420
Name: phnF Funciton: phophonate C-P lyase system transcriptional regulator PhnF, GntR family
Locus tag: Mpe_B0421
Name: phnD Funciton: Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)
Locus tag: Mpe_B0422
Name: phnC Funciton: Phosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1) |
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phnF
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phophonate C-P lyase system transcriptional regulator PhnF, GntR family
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phnD
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Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)
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phnC
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Phosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |