Regulon of VanR in Pseudomonas fluorescens Pf-5

Properties
Regulator type:	Transcription factor
TF locus tag:	PFL_3473
Regulator family:	GntR/Others
Regulation mode:	repressor
Biological process:	Vanillate utilization
Effector:	Vanillate
Regulog:	VanR - Pseudomonadaceae
Statistics of regulated genes:
- Genes	3
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 13 sites [see more]

Member of regulog collections

By taxonomy - Pseudomonadaceae
By trascription factor - VanR
By TF family - GntR/Others
By effector - Vanillate
By pathway - Vanillate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -203 Score: 4.8 Sequence: TGTGGATCCATT Locus tag: PFL_3480 Name: vanK Funciton: 4-hydroxybenzoate/vanillate transporter
	PFL_3480	vanK	4-hydroxybenzoate/vanillate transporter
Position: -150 Score: 5 Sequence: AATGGATCCATA Position: -128 Score: 4.7 Sequence: ACTGGATCCAAA Position: -44 Score: 5.3 Sequence: AATGGATCCATT Locus tag: PFL_3471 Name: vanA Funciton: Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82) Locus tag: PFL_3472 Name: vanB Funciton: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase (EC 1.14.13.-)
	PFL_3471	vanA	Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82)
	PFL_3472	vanB	Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase (EC 1.14.13.-)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD