Profile of regulator VanR in Pseudomonadaceae
Properties
| Regulator family: |
GntR/Others |
| Regulation mode: |
repressor |
| Biological process: |
Vanillate utilization |
| Effector: |
Vanillate |
| Regulog: |
VanR - Pseudomonadaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Pseudomonas aeruginosa PAO1
|
|
PA4904 |
vanA |
-13 |
3.5 |
AGAGGATCCGAC |
|
PA4904 |
vanA |
-222 |
5.4 |
ATTGGATCCATT |
|
PA4904 |
vanA |
-38 |
5.5 |
ATTGGATCCAAT |
|
PA4903 |
vanK |
-168 |
5.4 |
AATGGATCCAAT |
|
Pseudomonas putida KT2440
|
|
PP3736 |
vanA |
-41 |
5.3 |
AATGGATCCATT |
|
PP3736 |
vanA |
-126 |
4.8 |
AATGGATCCACT |
|
PP3740 |
vanK |
-195 |
4.8 |
TGTGGATCCATT |
|
Pseudomonas syringae pv. tomato str. DC3000
|
|
PSPTO2904 |
vanA |
-138 |
4.6 |
CATGGATCCATT |
|
PSPTO2904 |
vanA |
-42 |
4.6 |
TGTGGATCCATA |
|
Pseudomonas fluorescens Pf-5
|
|
PFL_3480 |
vanK |
-203 |
4.8 |
TGTGGATCCATT |
|
PFL_3471 |
vanA |
-44 |
5.3 |
AATGGATCCATT |
|
PFL_3471 |
vanA |
-150 |
5 |
AATGGATCCATA |
|
PFL_3471 |
vanA |
-128 |
4.7 |
ACTGGATCCAAA |
Export
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