Regulon of FadP in Leptothrix cholodnii SP-6

Properties
Regulator type:	Transcription factor
TF locus tag:	Lcho_4033
Regulator family:	TetR
Regulation mode:
Biological process:	Fatty acid degradation
Effector:
Regulog:	FadP - Comamonadaceae
Statistics of regulated genes:
- Genes	10
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 46 sites [see more]

Member of regulog collections

By trascription factor - FadP
By taxonomy - Comamonadaceae
By TF family - TetR
By pathway - Fatty acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -99 Score: 5.3 Sequence: TAGTACGATCGTGCTT Locus tag: Lcho_2540 Name: etfB Funciton: Electron transfer flavoprotein, beta subunit Locus tag: Lcho_2539 Name: etfA Funciton: Electron transfer flavoprotein, alpha subunit Locus tag: Lcho_2538 Name: acdH2 Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3) Locus tag: Lcho_2537 Name: null Funciton: Dioxygenases related to 2-nitropropane dioxygenase
	Lcho_2540	etfB	Electron transfer flavoprotein, beta subunit
	Lcho_2539	etfA	Electron transfer flavoprotein, alpha subunit
	Lcho_2538	acdH2	Acyl-CoA dehydrogenase (EC 1.3.99.3)
	Lcho_2537		Dioxygenases related to 2-nitropropane dioxygenase
Position: -108 Score: 5.1 Sequence: AAGCACGGTCGTGCTA Locus tag: Lcho_2069 Name: etfD Funciton: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
	Lcho_2069	etfD	Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
Position: -30 Score: 5.7 Sequence: TAGCACGATCGTTCGA Locus tag: Lcho_4033 Name: fadP Funciton: Predicted transcriptional regulator for fatty acid degradation FadP, TetR family Locus tag: Lcho_4032 Name: acdH Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3) Locus tag: Lcho_4031 Name: acdB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) Locus tag: Lcho_4030 Name: acdA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Locus tag: Lcho_4029 Name: echH Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
	Lcho_4033	fadP	Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
	Lcho_4032	acdH	Acyl-CoA dehydrogenase (EC 1.3.99.3)
	Lcho_4031	acdB	Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
	Lcho_4030	acdA	3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
	Lcho_4029	echH	Enoyl-CoA hydratase (EC 4.2.1.17)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD