Regulon of FadP in Leptothrix cholodnii SP-6
| Regulator type: | Transcription factor |
| TF locus tag: | Lcho_4033 |
| Regulator family: | TetR |
| Regulation mode: | |
| Biological process: | Fatty acid degradation |
| Effector: | |
| Regulog: | FadP - Comamonadaceae |
| Statistics of regulated genes: | |
| - Genes | 10 |
| - Operons | 3 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - FadP
- By taxonomy - Comamonadaceae
- By TF family - TetR
- By pathway - Fatty acid degradation
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -99
Score: 5.3 Sequence: TAGTACGATCGTGCTT
Locus tag: Lcho_2540
Name: etfB Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: Lcho_2539
Name: etfA Funciton: Electron transfer flavoprotein, alpha subunit
Locus tag: Lcho_2538
Name: acdH2 Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
Locus tag: Lcho_2537
Name: null Funciton: Dioxygenases related to 2-nitropropane dioxygenase |
|||
|
etfB
|
Electron transfer flavoprotein, beta subunit
|
||
|
etfA
|
Electron transfer flavoprotein, alpha subunit
|
||
|
acdH2
|
Acyl-CoA dehydrogenase (EC 1.3.99.3)
|
||
|
Dioxygenases related to 2-nitropropane dioxygenase
|
|||
|
Position: -108
Score: 5.1 Sequence: AAGCACGGTCGTGCTA
Locus tag: Lcho_2069
Name: etfD Funciton: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1) |
|||
|
etfD
|
Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
|
||
|
Position: -30
Score: 5.7 Sequence: TAGCACGATCGTTCGA
Locus tag: Lcho_4033
Name: fadP Funciton: Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
Locus tag: Lcho_4032
Name: acdH Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
Locus tag: Lcho_4031
Name: acdB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
Locus tag: Lcho_4030
Name: acdA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Locus tag: Lcho_4029
Name: echH Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) |
|||
|
fadP
|
Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
|
||
|
acdH
|
Acyl-CoA dehydrogenase (EC 1.3.99.3)
|
||
|
acdB
|
Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
|
||
|
acdA
|
3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
|
||
|
echH
|
Enoyl-CoA hydratase (EC 4.2.1.17)
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |