Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of FadP in Delftia acidovorans SPH-1

Properties
Regulator type: Transcription factor
TF locus tag: Daci_1336
Regulator family: TetR
Regulation mode:
Biological process: Fatty acid degradation
Effector:
Regulog: FadP - Comamonadaceae
Statistics of regulated genes:
- Genes 17
- Operons 4
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 46 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -33
Score: 5
Sequence: TAGCACGAACGTTCGT
Locus tag: Daci_1336
Name: fadP
Funciton: Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
Locus tag: Daci_1337
Name: acdH
Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
Locus tag: Daci_1338
Name: null
Funciton: hypothetical protein
Locus tag: Daci_1339
Name: acdB
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
Locus tag: Daci_1340
Name: acdA
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Locus tag: Daci_1341
Name: null
Funciton: alpha/beta hydrolase-like
Locus tag: Daci_1342
Name: null
Funciton: TesB-like acyl-CoA thioesterase 2
Locus tag: Daci_1343
Name: echH
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Daci_1336
fadP
Predicted transcriptional regulator for fatty acid degradation FadP, TetR family
Daci_1337
acdH
Acyl-CoA dehydrogenase (EC 1.3.99.3)
Daci_1338
hypothetical protein
Daci_1339
acdB
Enoyl-CoA hydratase (EC 4.2.1.17) / 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
Daci_1340
acdA
3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Daci_1341
alpha/beta hydrolase-like
Daci_1342
TesB-like acyl-CoA thioesterase 2
Daci_1343
echH
Enoyl-CoA hydratase (EC 4.2.1.17)
Position: -138
Score: 5.2
Sequence: TGGCACGATCGTTCTT
Locus tag: Daci_2390
Name: etfB
Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: Daci_2391
Name: etfA
Funciton: Electron transfer flavoprotein, alpha subunit
Locus tag: Daci_2392
Name: null
Funciton: Extracellular ligand-binding receptor
Locus tag: Daci_2393
Name: acdH2
Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
Locus tag: Daci_2394
Name: null
Funciton: Dioxygenases related to 2-nitropropane dioxygenase
Daci_2390
etfB
Electron transfer flavoprotein, beta subunit
Daci_2391
etfA
Electron transfer flavoprotein, alpha subunit
Daci_2392
Extracellular ligand-binding receptor
Daci_2393
acdH2
Acyl-CoA dehydrogenase (EC 1.3.99.3)
Daci_2394
Dioxygenases related to 2-nitropropane dioxygenase
Position: -60
Score: 4.5
Sequence: CCGAACGAACGTTCGG
Locus tag: Daci_4310
Name: etfD
Funciton: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
Daci_4310
etfD
Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
Position: -41
Score: 5.5
Sequence: TCGCACGATCGTTCTT
Locus tag: Daci_3313
Name: fadB
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
Locus tag: Daci_3314
Name: fadA
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Locus tag: Daci_3315
Name: acdH3
Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
Daci_3313
fadB
Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
Daci_3314
fadA
3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Daci_3315
acdH3
Acyl-CoA dehydrogenase (EC 1.3.99.3)
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