Regulon of FadP in Acidovorax avenae subsp. citrulli AAC00-1

Properties
Regulator type:	Transcription factor
TF locus tag:	Aave_4090
Regulator family:	TetR
Regulation mode:
Biological process:	Fatty acid degradation
Effector:
Regulog:	FadP - Comamonadaceae
Statistics of regulated genes:
- Genes	12
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 46 sites [see more]

Member of regulog collections

By trascription factor - FadP
By taxonomy - Comamonadaceae
By TF family - TetR
By pathway - Fatty acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -142 Score: 5.3 Sequence: AAGCACGATCGTTCTT Locus tag: Aave_2168 Name: etfB Funciton: Electron transfer flavoprotein, beta subunit Locus tag: Aave_2169 Name: etfA Funciton: Electron transfer flavoprotein, alpha subunit Locus tag: Aave_2170 Name: acdH2 Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3) Locus tag: Aave_2171 Name: null Funciton: Dioxygenases related to 2-nitropropane dioxygenase
	Aave_2168	etfB	Electron transfer flavoprotein, beta subunit
	Aave_2169	etfA	Electron transfer flavoprotein, alpha subunit
	Aave_2170	acdH2	Acyl-CoA dehydrogenase (EC 1.3.99.3)
	Aave_2171		Dioxygenases related to 2-nitropropane dioxygenase
Position: -31 Score: 5.3 Sequence: AAGAACGATCGTGCTT Locus tag: Aave_0441 Name: null Funciton: FIG026291: Hypothetical periplasmic protein
	Aave_0441		FIG026291: Hypothetical periplasmic protein
Position: -121 Score: 5.4 Sequence: AAGAACGATCGTTCGT Locus tag: Aave_3139 Name: etfD Funciton: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
	Aave_3139	etfD	Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
Position: -66 Score: 5.3 Sequence: AAGCACGACCGTGCTA Locus tag: Aave_3439 Name: acdQ Funciton: Acyl-CoA dehydrogenase, long-chain specific, mitochondrial precursor (EC 1.3.99.13) Locus tag: Aave_3440 Name: acdP Funciton: Acyl-CoA dehydrogenase family protein
	Aave_3439	acdQ	Acyl-CoA dehydrogenase, long-chain specific, mitochondrial precursor (EC 1.3.99.13)
	Aave_3440	acdP	Acyl-CoA dehydrogenase family protein
Position: -41 Score: 5.3 Sequence: AAGCACGACCGTTCTT Locus tag: Aave_2880 Name: fadB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) Locus tag: Aave_2879 Name: fadA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) Locus tag: Aave_2878 Name: null Funciton: Phenylacetic acid degradation protein paaI Locus tag: Aave_2877 Name: acdH3 Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
	Aave_2880	fadB	Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
	Aave_2879	fadA	3-ketoacyl-CoA thiolase (EC 2.3.1.16)
	Aave_2878		Phenylacetic acid degradation protein paaI
	Aave_2877	acdH3	Acyl-CoA dehydrogenase (EC 1.3.99.3)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD