Regulon of RutR in Roseovarius sp. 217

Properties
Regulator type:	Transcription factor
TF locus tag:	ROS217_12316
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Pyrimidine utilization
Effector:	Uracil
Regulog:	RutR - Rhodobacterales
Statistics of regulated genes:
- Genes	14
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 62 sites [see more]

Member of regulog collections

By trascription factor - RutR
By taxonomy - Rhodobacterales
By TF family - TetR
By effector - Uracil
By pathway - Pyrimidine utilization

Regulated operons
	Locus Tag	Name	Function
Position: -58 Score: 5.8 Sequence: TTTTTACCATTTGGTAAACT Locus tag: ROS217_12316 Name: rutR Funciton: Transcriptional regulator RutR of pyrimidine catabolism, TetR family
	ROS217_12316	rutR	Transcriptional regulator RutR of pyrimidine catabolism, TetR family
Position: -44 Score: 6.2 Sequence: ATTTTACCAATTGGTAAAAC Locus tag: ROS217_10977 Name: pytM Funciton: Predicted pyrimidine ABC transporter, substrate-binding protein Locus tag: ROS217_10972 Name: pytN Funciton: Predicted pyrimidine ABC transporter, ATP-binding protein Locus tag: ROS217_10967 Name: pytO Funciton: Predicted pyrimidine ABC transporter, permease protein 1 Locus tag: ROS217_10962 Name: pytQ Funciton: Predicted pyrimidine ABC transporter, permease protein 2 Locus tag: ROS217_10957 Name: codA Funciton: Cytosine deaminase (EC 3.5.4.1)
	ROS217_10977	pytM	Predicted pyrimidine ABC transporter, substrate-binding protein
	ROS217_10972	pytN	Predicted pyrimidine ABC transporter, ATP-binding protein
	ROS217_10967	pytO	Predicted pyrimidine ABC transporter, permease protein 1
	ROS217_10962	pytQ	Predicted pyrimidine ABC transporter, permease protein 2
	ROS217_10957	codA	Cytosine deaminase (EC 3.5.4.1)
Position: -69 Score: 6.2 Sequence: ATTTTACCAATTGATAAAAT Locus tag: ROS217_06720 Name: pydX Funciton: Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism Locus tag: ROS217_06715 Name: pydA Funciton: Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2)
	ROS217_06720	pydX	Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism
	ROS217_06715	pydA	Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2)
Position: -33 Score: 5.7 Sequence: AGTTTACCAAATGGTAAAAA Locus tag: ROS217_12311 Name: pydC Funciton: Beta-ureidopropionase (EC 3.5.1.6) Locus tag: ROS217_12306 Name: pydB Funciton: phenylhydantoinase Locus tag: ROS217_12301 Name: pytA Funciton: Pyrimidine ABC transporter, ATP-binding protein Locus tag: ROS217_12296 Name: pytB Funciton: Pyrimidine ABC transporter, permease protein 1 Locus tag: ROS217_12291 Name: pytC Funciton: Pyrimidine ABC transporter, permease protein 2 Locus tag: ROS217_12286 Name: pytD Funciton: Pyrimidine ABC transporter, substrate-binding protein
	ROS217_12311	pydC	Beta-ureidopropionase (EC 3.5.1.6)
	ROS217_12306	pydB	phenylhydantoinase
	ROS217_12301	pytA	Pyrimidine ABC transporter, ATP-binding protein
	ROS217_12296	pytB	Pyrimidine ABC transporter, permease protein 1
	ROS217_12291	pytC	Pyrimidine ABC transporter, permease protein 2
	ROS217_12286	pytD	Pyrimidine ABC transporter, substrate-binding protein

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD