Regulon of RutR in Oceanicola batsensis HTCC2597

Properties
Regulator type:	Transcription factor
TF locus tag:	OB2597_04330
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Pyrimidine utilization
Effector:	Uracil
Regulog:	RutR - Rhodobacterales
Statistics of regulated genes:
- Genes	5
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 62 sites [see more]

Member of regulog collections

By trascription factor - RutR
By taxonomy - Rhodobacterales
By TF family - TetR
By effector - Uracil
By pathway - Pyrimidine utilization

Regulated operons
	Locus Tag	Name	Function
Position: -177 Score: 5.9 Sequence: TTTTGACCAATCGGTCAAAG Locus tag: OB2597_04330 Name: rutR Funciton: Transcriptional regulator RutR of pyrimidine catabolism, TetR family
	OB2597_04330	rutR	Transcriptional regulator RutR of pyrimidine catabolism, TetR family
Position: -66 Score: 5.9 Sequence: AATTTACCATTTGATAAAAA Locus tag: OB2597_04355 Name: pydX Funciton: Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism Locus tag: OB2597_04350 Name: OB2597_04350 Funciton: Hypothetical protein Locus tag: OB2597_04345 Name: pydA Funciton: Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2)
	OB2597_04355	pydX	Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism
	OB2597_04350	OB2597_04350	Hypothetical protein
	OB2597_04345	pydA	Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2)
Position: -43 Score: 6 Sequence: CTTTGACCGATTGGTCAAAA Locus tag: OB2597_04325 Name: pydC Funciton: Beta-ureidopropionase (EC 3.5.1.6)
	OB2597_04325	pydC	Beta-ureidopropionase (EC 3.5.1.6)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD