Regulon of RutR in Marinomonas sp. MWYL1
| Regulator type: | Transcription factor |
| TF locus tag: | Mmwyl1_1423 |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Pyrimidine utilization |
| Effector: | Uracil |
| Regulog: | RutR - Oceanospirillales/Alteromonadales |
| Statistics of regulated genes: | |
| - Genes | 14 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - RutR
- By taxonomy - Oceanospirillales/Alteromonadales
- By TF family - TetR
- By effector - Uracil
- By pathway - Pyrimidine utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -62
Score: 4 Sequence: GTATAACCATTCGGTCAAAC
Locus tag: Mmwyl1_1677
Name: guaD Funciton: Guanine deaminase (EC 3.5.4.3) |
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guaD
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Guanine deaminase (EC 3.5.4.3)
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Position: -83
Score: 5 Sequence: ATTTGTACGATTGGTCAGGT
Locus tag: Mmwyl1_2699
Name: xdhA Funciton: Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4)
Locus tag: Mmwyl1_2698
Name: xdhB Funciton: Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)
Locus tag: Mmwyl1_2697
Name: xdhC Funciton: XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase) |
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xdhA
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Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4)
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xdhB
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Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)
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xdhC
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XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)
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Position: -64
Score: 4.1 Sequence: TTTTGACCAGTTAGGCAGGG
Locus tag: Mmwyl1_0632
Name: ppuB Funciton: Predicted ABC transporter, substrate-binding protein precursor
Locus tag: Mmwyl1_0633
Name: ppuA Funciton: Predicted ABC transporter, ATP-binding protein
Locus tag: Mmwyl1_0634
Name: ppuC Funciton: Predicted ABC transporter, permease protein
Locus tag: Mmwyl1_0635
Name: ppuD Funciton: Predicted ABC transporter, inner membrane protein precursor |
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ppuB
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Predicted ABC transporter, substrate-binding protein precursor
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ppuA
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Predicted ABC transporter, ATP-binding protein
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ppuC
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Predicted ABC transporter, permease protein
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ppuD
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Predicted ABC transporter, inner membrane protein precursor
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Position: -117
Score: 4.9 Sequence: TACTGACCAAATGATCAGTT
Locus tag: Mmwyl1_1566
Name: pbuT Funciton: Xanthine/uracil permease |
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pbuT
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Xanthine/uracil permease
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Position: -185
Score: 4.5 Sequence: TATTAACTAGTCGGTCAGAT
Locus tag: Mmwyl1_1926
Name: ppuA Funciton: Predicted ABC transporter, ATP-binding protein
Locus tag: Mmwyl1_1925
Name: ppuC Funciton: Predicted ABC transporter, permease protein
Locus tag: Mmwyl1_1924
Name: ppuD Funciton: Predicted ABC transporter, inner membrane protein precursor
Locus tag: Mmwyl1_1923
Name: ppuB Funciton: Predicted ABC transporter, substrate-binding protein precursor
Locus tag: Mmwyl1_1922
Name: add Funciton: Adenosine deaminase (EC 3.5.4.4) |
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ppuA
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Predicted ABC transporter, ATP-binding protein
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ppuC
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Predicted ABC transporter, permease protein
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ppuD
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Predicted ABC transporter, inner membrane protein precursor
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ppuB
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Predicted ABC transporter, substrate-binding protein precursor
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add
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Adenosine deaminase (EC 3.5.4.4)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |