Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of RutR in Marinomonas sp. MWYL1

Properties
Regulator type: Transcription factor
TF locus tag: Mmwyl1_1423
Regulator family: TetR
Regulation mode: repressor
Biological process: Pyrimidine utilization
Effector: Uracil
Regulog: RutR - Oceanospirillales/Alteromonadales
Statistics of regulated genes:
- Genes 14
- Operons 5
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 32 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -62
Score: 4
Sequence: GTATAACCATTCGGTCAAAC
Locus tag: Mmwyl1_1677
Name: guaD
Funciton: Guanine deaminase (EC 3.5.4.3)
guaD
Guanine deaminase (EC 3.5.4.3)

Position: -83
Score: 5
Sequence: ATTTGTACGATTGGTCAGGT
Locus tag: Mmwyl1_2699
Name: xdhA
Funciton: Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4)
Locus tag: Mmwyl1_2698
Name: xdhB
Funciton: Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)
Locus tag: Mmwyl1_2697
Name: xdhC
Funciton: XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)
xdhA
Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4)
xdhB
Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)
xdhC
XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)

Position: -64
Score: 4.1
Sequence: TTTTGACCAGTTAGGCAGGG
Locus tag: Mmwyl1_0632
Name: ppuB
Funciton: Predicted ABC transporter, substrate-binding protein precursor
Locus tag: Mmwyl1_0633
Name: ppuA
Funciton: Predicted ABC transporter, ATP-binding protein
Locus tag: Mmwyl1_0634
Name: ppuC
Funciton: Predicted ABC transporter, permease protein
Locus tag: Mmwyl1_0635
Name: ppuD
Funciton: Predicted ABC transporter, inner membrane protein precursor
ppuB
Predicted ABC transporter, substrate-binding protein precursor
ppuA
Predicted ABC transporter, ATP-binding protein
ppuC
Predicted ABC transporter, permease protein
ppuD
Predicted ABC transporter, inner membrane protein precursor

Position: -117
Score: 4.9
Sequence: TACTGACCAAATGATCAGTT
Locus tag: Mmwyl1_1566
Name: pbuT
Funciton: Xanthine/uracil permease
pbuT
Xanthine/uracil permease

Position: -185
Score: 4.5
Sequence: TATTAACTAGTCGGTCAGAT
Locus tag: Mmwyl1_1926
Name: ppuA
Funciton: Predicted ABC transporter, ATP-binding protein
Locus tag: Mmwyl1_1925
Name: ppuC
Funciton: Predicted ABC transporter, permease protein
Locus tag: Mmwyl1_1924
Name: ppuD
Funciton: Predicted ABC transporter, inner membrane protein precursor
Locus tag: Mmwyl1_1923
Name: ppuB
Funciton: Predicted ABC transporter, substrate-binding protein precursor
Locus tag: Mmwyl1_1922
Name: add
Funciton: Adenosine deaminase (EC 3.5.4.4)
ppuA
Predicted ABC transporter, ATP-binding protein
ppuC
Predicted ABC transporter, permease protein
ppuD
Predicted ABC transporter, inner membrane protein precursor
ppuB
Predicted ABC transporter, substrate-binding protein precursor
add
Adenosine deaminase (EC 3.5.4.4)
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