Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator RutR in Oceanospirillales/Alteromonadales

Properties
Regulator family: TetR
Regulation mode: repressor
Biological process: Pyrimidine utilization
Effector: Uracil
Regulog: RutR - Oceanospirillales/Alteromonadales
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Hahella chejuensis KCTC 2396
HCH_02310 ppuA -111 5.1 TCTTGACTACTTGGTCAGAA
HCH_01101 ppuA -235 5.2 AGTTGATCAATTGGTCAAAT
HCH_01101 ppuA -208 5 AACTGACCAGTTGGCCAAAA
HCH_01099 xdhA -157 5.2 ACCTGACCATGTAGACAAGT
HCH_01504 ppuB -106 5 ACCTGTCCGGCTGGTCATAA
Marinobacter sp. ELB17
MELB17_16803 rutR -240 5.3 ACCTGACCAAATAGTCTAGT
MELB17_16808 xdhA -196 5.2 ACTAGACTATTTGGTCAGGT
MELB17_16798 guaD -114 4.5 TGCTGACTTAGTGGTCAAGT
Oceanobacter sp. RED65
RED65_12897 pbuT -127 4.4 TTTTAACCCTCTGGTCAGGT
RED65_04290 xdhA -230 5.4 AACTGACCATATGGACAGAA
RED65_04290 xdhA -125 5.7 AGCTGACTAATTGGTCAGAT
RED65_11380 add -35 4.9 TCCTGATCAGATAGTCAATT
Marinomonas sp. MWYL1
Mmwyl1_1566 pbuT -117 4.9 TACTGACCAAATGATCAGTT
Mmwyl1_1677 guaD -62 4 GTATAACCATTCGGTCAAAC
Mmwyl1_1926 ppuA -185 4.5 TATTAACTAGTCGGTCAGAT
Mmwyl1_0632 ppuB -64 4.1 TTTTGACCAGTTAGGCAGGG
Mmwyl1_2699 xdhA -83 5 ATTTGTACGATTGGTCAGGT
Teredinibacter turnerae T7901
TERTU_2072 hpt -96 5.8 TTCTGACCAAATGGTCAGCT
TERTU_2067 xdhA -252 4.7 ATTTGACCACTAGGACAAAT
TERTU_2067 xdhA -89 5.6 ACCTGACCGAATGGCCAGCT
TERTU_2069 rutR -72 4.6 ATTTGTCCTAGTGGTCAAAT
TERTU_2069 rutR -235 5.3 AGCTGGCCATTCGGTCAGGT
Cellvibrio japonicus Ueda107
CJA_0583 nupP -70 4.4 ATCCATCCAAATGGTCAATT
CJA_0546 xdhA -201 4.8 ACCTGACTGCACGGACAAAA
CJA_0546 xdhA -77 4.2 AATTGTCTATTTGGCCAGTC
CJA_0545 ppuA -165 4.5 GACTGGCCAAATAGACAATT
CJA_0545 ppuA -41 4.4 TTTTGTCCGTGCAGTCAGGT
Chromohalobacter salexigens DSM 3043
Csal_1789 xdhA -75 5 AGTTGACCAGATGGTCATAC
Csal_1790 rutR -87 5 GTATGACCATCTGGTCAACT
Reinekea sp. MED297
MED297_21307 ppuA -2 4.3 TCATGACTGCTCAGACAGAT
MED297_06818 guaD -156 4.3 TGTTGACCATGTGGTTAGGA
MED297_08316 xdhA -147 5.9 ACCTGACCGCATGGTCAGCT
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