Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of RutR in Alteromonadales bacterium TW-7

Properties
Regulator type: Transcription factor
TF locus tag: ATW7_02067
Regulator family: TetR
Regulation mode: repressor
Biological process: Pyrimidine utilization
Effector: Uracil
Regulog: RutR - Alteromonadales
Statistics of regulated genes:
- Genes 9
- Operons 2
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 19 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -61
Score: 5.3
Sequence: AATTGACCTTTCGGTCAGTA
Locus tag: ATW7_02067
Name: rutR
Funciton: Transcriptional regulator RutR of pyrimidine catabolism, TetR family
rutR
Transcriptional regulator RutR of pyrimidine catabolism, TetR family

Position: -328
Score: 5.1
Sequence: ACATATCCTTTTGGTCAGGT
Position: -148
Score: 4.9
Sequence: AGTTAACCGATCGGTCAGGC
Locus tag: ATW7_02017
Name: xdhA
Funciton: Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4)
Locus tag: ATW7_02012
Name: xdhB
Funciton: Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)
Locus tag: ATW7_02007
Name: xdhC
Funciton: XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)
Locus tag: ATW7_02002
Name: pucL
Funciton: Uricase (EC 1.7.3.3)
Locus tag: ATW7_01997
Name: pucM
Funciton: Hydroxyisourate hydrolase (EC 3.5.2.17)
Locus tag: ATW7_01992
Name: guaD
Funciton: Guanine deaminase (EC 3.5.4.3)
Locus tag: ATW7_01987
Name: COG3748
Funciton: hypothetical protein, COG3748
Locus tag: ATW7_01982
Name: COG0726
Funciton: putative polysaccharide deacetylase family protein
xdhA
Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4)
xdhB
Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)
xdhC
XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)
pucL
Uricase (EC 1.7.3.3)
pucM
Hydroxyisourate hydrolase (EC 3.5.2.17)
guaD
Guanine deaminase (EC 3.5.4.3)
COG3748
hypothetical protein, COG3748
COG0726
putative polysaccharide deacetylase family protein
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Regulated Genes [ Tab delimited format ] DOWNLOAD
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