Regulon of RutR in Alteromonadales bacterium TW-7

Properties
Regulator type:	Transcription factor
TF locus tag:	ATW7_02067
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Pyrimidine utilization
Effector:	Uracil
Regulog:	RutR - Alteromonadales
Statistics of regulated genes:
- Genes	9
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 19 sites [see more]

Member of regulog collections

By trascription factor - RutR
By taxonomy - Alteromonadales
By TF family - TetR
By effector - Uracil
By pathway - Pyrimidine utilization

Regulated operons
	Locus Tag	Name	Function
Position: -61 Score: 5.3 Sequence: AATTGACCTTTCGGTCAGTA Locus tag: ATW7_02067 Name: rutR Funciton: Transcriptional regulator RutR of pyrimidine catabolism, TetR family
	ATW7_02067	rutR	Transcriptional regulator RutR of pyrimidine catabolism, TetR family
Position: -328 Score: 5.1 Sequence: ACATATCCTTTTGGTCAGGT Position: -148 Score: 4.9 Sequence: AGTTAACCGATCGGTCAGGC Locus tag: ATW7_02017 Name: xdhA Funciton: Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4) Locus tag: ATW7_02012 Name: xdhB Funciton: Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4) Locus tag: ATW7_02007 Name: xdhC Funciton: XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase) Locus tag: ATW7_02002 Name: pucL Funciton: Uricase (EC 1.7.3.3) Locus tag: ATW7_01997 Name: pucM Funciton: Hydroxyisourate hydrolase (EC 3.5.2.17) Locus tag: ATW7_01992 Name: guaD Funciton: Guanine deaminase (EC 3.5.4.3) Locus tag: ATW7_01987 Name: COG3748 Funciton: hypothetical protein, COG3748 Locus tag: ATW7_01982 Name: COG0726 Funciton: putative polysaccharide deacetylase family protein
	ATW7_02017	xdhA	Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4)
	ATW7_02012	xdhB	Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)
	ATW7_02007	xdhC	XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)
	ATW7_02002	pucL	Uricase (EC 1.7.3.3)
	ATW7_01997	pucM	Hydroxyisourate hydrolase (EC 3.5.2.17)
	ATW7_01992	guaD	Guanine deaminase (EC 3.5.4.3)
	ATW7_01987	COG3748	hypothetical protein, COG3748
	ATW7_01982	COG0726	putative polysaccharide deacetylase family protein

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD