Profile of regulator RutR in Alteromonadales

Member of regulog collections

Transcription factor binding sites

	Locus Tag	Name	Position	Score	Sequence
Pseudoalteromonas atlantica T6c
	Patl_0536	omp1	-127	4.3	TTTTGACCAGTTAGTCAAAT
	Patl_0533	udk	-180	5.3	ACTTGACCATATGGTCCACA
	Patl_2222	add2	-27	5.5	GACTGACCATTTGGTCAAAT
	Patl_2225	omp2	-112	5.7	ACCTGACCATTTGGACAAGT
	Patl_2423	rutR	-242	5.9	ACCAGACCAGTTGGTCAGGT
	Patl_2421	pbuT	-98	5.2	GCTAGACTAAATGGTCAGGT
	Patl_2424	xdhA	-91	5.7	ACCTGACCAACTGGTCTGGT
Alteromonas macleodii 'Deep ecotype'
	MADE_02502	omp2	-124	5.2	AGTTGACCAACTGGTTAAGT
	MADE_00730	udk	-183	4.9	AACTGACCACTTGGAGAACT
	MADE_02501	pbuT2	-353	5.5	AACAGACCAGTTGGTCAACA
	MADE_00733	omp1	-207	5.7	ACTTGACCATGTGGTCAGGT
	MADE_02510	pbuT	-71	5.7	AGTTGACTAATTGGTCAGTT
	MADE_02515	xdhA	-83	5.8	AATTGACCATTTGGTCTACT
Colwellia psychrerythraea 34H
	CPS_1969	cdd	-70	5.8	ACTTGACCATATGGTCAGCA
	CPS_1974	udk	-182	5.1	CTATGACCAACTGGTCAAGT
	CPS_4864	xdhA	-94	3.5	AGCTGACACTTGTGTCAACT
Alteromonadales bacterium TW-7
	ATW7_02067	rutR	-61	5.3	AATTGACCTTTCGGTCAGTA
	ATW7_02017	xdhA	-148	4.9	AGTTAACCGATCGGTCAGGC
	ATW7_02017	xdhA	-328	5.1	ACATATCCTTTTGGTCAGGT

Export
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --