Regulon of RutR in Photobacterium profundum SS9
| Regulator type: | Transcription factor |
| TF locus tag: | PBPRA2268 |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Pyrimidine utilization |
| Effector: | Uracil |
| Regulog: | RutR - Vibrionales |
| Statistics of regulated genes: | |
| - Genes | 4 |
| - Operons | 1 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - RutR
- By taxonomy - Vibrionales
- By TF family - TetR
- By effector - Uracil
- By pathway - Pyrimidine utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -74
Score: 5.6 Sequence: AGTTGACTAAAAAGTCAGCT
Position: -47
Score: 5.9 Sequence: TATTGACTCAAAGGTCAGAA
Locus tag: PBPRA2243
Name: xdhA Funciton: Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4)
Locus tag: PBPRA2244
Name: xdhB Funciton: Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)
Locus tag: PBPRA2245
Name: xdhC Funciton: XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)
Locus tag: PBPRA2246
Name: guaD Funciton: Guanine deaminase (EC 3.5.4.3) |
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xdhA
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Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A (1.17.1.4)
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xdhB
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Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4)
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xdhC
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XdhC protein (assists in molybdopterin insertion into xanthine dehydrogenase)
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guaD
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Guanine deaminase (EC 3.5.4.3)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |