Regulon of PsrA in Phenylobacterium zucineum HLK1
| Regulator type: | Transcription factor |
| TF locus tag: | PHZ_c0903 |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Fatty acid degradation |
| Effector: | Oleate |
| Regulog: | PsrA - Caulobacterales |
| Statistics of regulated genes: | |
| - Genes | 7 |
| - Operons | 6 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - PsrA
- By taxonomy - Caulobacterales
- By TF family - TetR
- By effector - Oleate
- By pathway - Fatty acid degradation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -53
Score: 5 Sequence: GTTCCAACGCTTGTTTAAAA
Locus tag: PHZ_c0760
Name: fadA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) |
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fadA
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3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
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Position: -81
Score: 4.6 Sequence: CCTATAACACGCGTTTGAAT
Locus tag: PHZ_c3217
Name: fadB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) |
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fadB
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Enoyl-CoA hydratase (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
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Position: -39
Score: 5.4 Sequence: AGTCAAACAACTGTTTGGGA
Locus tag: PHZ_c3135
Name: null Funciton: Oxidoreductase, short-chain dehydrogenase/reductase family |
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Oxidoreductase, short-chain dehydrogenase/reductase family
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Position: -36
Score: 5.3 Sequence: GTTCAAACGATTGTTCGCCT
Locus tag: PHZ_c0904
Name: null Funciton: Bll6692 protein
Locus tag: PHZ_c0903
Name: psrA Funciton: Transcriptional regulator for fatty acid degradation PsrA, TetR family |
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Bll6692 protein
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psrA
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Transcriptional regulator for fatty acid degradation PsrA, TetR family
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Position: -32
Score: 6 Sequence: ATTCAAACAAGCGTTTGAAC
Locus tag: PHZ_c3174
Name: acdH Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3) |
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acdH
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Acyl-CoA dehydrogenase (EC 1.3.99.3)
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Position: -116
Score: 5.2 Sequence: TTTCAAACGGCCGTTAGACC
Locus tag: PHZ_c3105
Name: null Funciton: alpha/beta hydrolase fold protein |
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alpha/beta hydrolase fold protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |