Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of PsrA in Caulobacter sp. K31

Properties
Regulator type: Transcription factor
TF locus tag: Caul_3323
Regulator family: TetR
Regulation mode: repressor
Biological process: Fatty acid degradation
Effector: Oleate
Regulog: PsrA - Caulobacterales
Statistics of regulated genes:
- Genes 30
- Operons 21
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 70 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -34
Score: 5.4
Sequence: ATTCAAACTAACGTTTAAAG
Locus tag: Caul_4752
Name: fadA
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Caul_4752
fadA
3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Position: -53
Score: 5.4
Sequence: CTTCAAACAACCGTTCAAAA
Locus tag: Caul_0813
Name: fadB
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
Locus tag: Caul_0814
Name: fadD
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Caul_0813
fadB
Enoyl-CoA hydratase (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
Caul_0814
fadD
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Position: -70
Score: 5
Sequence: ATCCGAACATCCGTTTGACT
Locus tag: Caul_4261
Name: null
Funciton: Bll1370 protein
Caul_4261
Bll1370 protein
Position: -29
Score: 5
Sequence: CGTCAAACATCCGTTCGAGA
Locus tag: Caul_1696
Name: null
Funciton: Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
Caul_1696
Beta-ketoadipyl CoA thiolase (EC 2.3.1.-)
Position: -28
Score: 5.4
Sequence: ATTCAAACAAACGTTTAGCG
Locus tag: Caul_0851
Name: null
Funciton: Oxidoreductase, short-chain dehydrogenase/reductase family
Caul_0851
Oxidoreductase, short-chain dehydrogenase/reductase family
Position: -97
Score: 5
Sequence: GTTCGAACAGACGTTTGCAT
Locus tag: Caul_2153
Name: fadD2
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Caul_2153
fadD2
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Position: -41
Score: 5.5
Sequence: CTTCGAACAATCGTTCGAAA
Locus tag: Caul_3321
Name: null
Funciton: Bll6692 protein
Caul_3321
Bll6692 protein
Position: -119
Score: 4.8
Sequence: TGACGAACGGACGTTTGAAT
Locus tag: Caul_1447
Name: null
Funciton: Acyl-CoA dehydrogenase family protein
Locus tag: Caul_1446
Name: null
Funciton: DSBA oxidoreductase
Locus tag: Caul_1445
Name: null
Funciton: Acyl-CoA dehydrogenase family protein
Caul_1447
Acyl-CoA dehydrogenase family protein
Caul_1446
DSBA oxidoreductase
Caul_1445
Acyl-CoA dehydrogenase family protein
Position: -43
Score: 5.2
Sequence: GTTCATACGCGTGTTTGAGT
Locus tag: Caul_1349
Name: echH
Funciton: Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17)
Caul_1349
echH
Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17)
Position: -25
Score: 5.3
Sequence: GATCAAACAGTTGTTTGAGG
Locus tag: Caul_4647
Name: null
Funciton: HAD-superfamily hydrolase
Locus tag: Caul_4648
Name: phhB
Funciton: Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96)
Caul_4647
HAD-superfamily hydrolase
Caul_4648
phhB
Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96)
Position: -40
Score: 5.8
Sequence: GTTCAAACTATCGTTTGAAT
Locus tag: Caul_4649
Name: null
Funciton: 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase
Caul_4649
2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase
Position: -26
Score: 5.4
Sequence: GTTCAAACGCTCGTTAGACT
Locus tag: Caul_0887
Name: paaI
Funciton: Phenylacetic acid degradation protein paaI
Locus tag: Caul_0888
Name: null
Funciton: alpha/beta hydrolase fold protein
Caul_0887
paaI
Phenylacetic acid degradation protein paaI
Caul_0888
alpha/beta hydrolase fold protein
Position: -41
Score: 5
Sequence: AATCAAACAACTGTTTACAA
Locus tag: Caul_1346
Name: null
Funciton: aldehyde dehydrogenase
Caul_1346
aldehyde dehydrogenase
Position: -34
Score: 4.8
Sequence: AAGAAAACAACTGTTTGGCG
Locus tag: Caul_1059
Name: null
Funciton: Methylsuccinyl-CoA dehydrogenase, predicted by (Erb et al, 2007)
Caul_1059
Methylsuccinyl-CoA dehydrogenase, predicted by (Erb et al, 2007)
Position: -45
Score: 5.9
Sequence: TTTCAAACAAGCGTTTGACA
Locus tag: Caul_4071
Name: acdH
Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
Caul_4071
acdH
Acyl-CoA dehydrogenase (EC 1.3.99.3)
Position: -82
Score: 5.3
Sequence: TTCCAAACGCTCGTTCGAAC
Locus tag: Caul_2048
Name: null
Funciton: Acyl-CoA dehydrogenase, long-chain specific (EC 1.3.99.13)
Locus tag: Caul_2049
Name: null
Funciton: Acyl-CoA dehydrogenase family protein
Caul_2048
Acyl-CoA dehydrogenase, long-chain specific (EC 1.3.99.13)
Caul_2049
Acyl-CoA dehydrogenase family protein
Position: -35
Score: 5.2
Sequence: CGCAAAACAAGTGTTTGAAG
Locus tag: Caul_0274
Name: null
Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Caul_0274
Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Position: -30
Score: 5
Sequence: CCTCAAACAACTGTTCGGGA
Locus tag: Caul_3066
Name: null
Funciton: Beta-lactamase class C and other penicillin binding proteins
Locus tag: Caul_3065
Name: null
Funciton: NADP-dependent quinone oxidoreductase, putative
Locus tag: Caul_3064
Name: fabL
Funciton: ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE (fabL) (NADPH) (EC 1.3.1.9)
Caul_3066
Beta-lactamase class C and other penicillin binding proteins
Caul_3065
NADP-dependent quinone oxidoreductase, putative
Caul_3064
fabL
ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE (fabL) (NADPH) (EC 1.3.1.9)
Position: -30
Score: 5
Sequence: TTTCGAACAAATGTTCGGGA
Locus tag: Caul_4412
Name: null
Funciton: Short-chain dehydrogenase/reductase SDR
Caul_4412
Short-chain dehydrogenase/reductase SDR
Position: -31
Score: 5.1
Sequence: AACCAAACACGCGTTTGAGG
Locus tag: Caul_3341
Name: null
Funciton: Oxidoreductase, short chain dehydrogenase/reductase family
Locus tag: Caul_3342
Name: fadL
Funciton: Long-chain fatty acid transport protein
Caul_3341
Oxidoreductase, short chain dehydrogenase/reductase family
Caul_3342
fadL
Long-chain fatty acid transport protein
Position: -42
Score: 5.8
Sequence: AGTCAAACAAATGTTTGAAT
Locus tag: Caul_4897
Name: paaI2
Funciton: Phenylacetic acid degradation protein paaI
Caul_4897
paaI2
Phenylacetic acid degradation protein paaI
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