Regulon of PsrA in Vibrio splendidus LGP32

Properties
Regulator type:	Transcription factor
TF locus tag:	VS_1841
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Fatty acid degradation
Effector:	Oleate
Regulog:	PsrA - Vibrionales
Statistics of regulated genes:
- Genes	8
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 49 sites [see more]

Member of regulog collections

By trascription factor - PsrA
By taxonomy - Vibrionales
By TF family - TetR
By effector - Oleate
By pathway - Fatty acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -72 Score: 5.1 Sequence: ATGTAAACGGTTGTTTGAAC Locus tag: VS_0938 Name: fadH Funciton: 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
	VS_0938	fadH	2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34)
Position: -147 Score: 5.5 Sequence: TGTTAAACAATTGTTTAAAA Locus tag: VS_0041 Name: fadB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) Locus tag: VS_0040 Name: fadA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
	VS_0041	fadB	Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
	VS_0040	fadA	3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Position: -78 Score: 5.8 Sequence: ATTTAAACGCCTGTTTGATT Locus tag: VS_0864 Name: fadI Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Locus tag: VS_0865 Name: fadJ Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
	VS_0864	fadI	3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
	VS_0865	fadJ	Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
Position: -23 Score: 5.5 Sequence: TTTCAAACAGTTGTTTAATA Locus tag: VS_1841 Name: psrA Funciton: Predicted transcriptional regulator for fatty acid degradation PsrA, TetR family Locus tag: VS_1840 Name: fadE Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
	VS_1841	psrA	Predicted transcriptional regulator for fatty acid degradation PsrA, TetR family
	VS_1840	fadE	Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Position: -112 Score: 5.1 Sequence: ATTTAAACAAGTGTTTGAGC Locus tag: VS_2220 Name: fadD Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
	VS_2220	fadD	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD