Profile of regulator PsrA in Vibrionales
Properties
| Regulator family: |
TetR |
| Regulation mode: |
repressor |
| Biological process: |
Fatty acid degradation |
| Effector: |
Oleate |
| Regulog: |
PsrA - Vibrionales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Vibrio cholerae O1 biovar eltor str. N16961
|
|
VC1993 |
fadH |
-81 |
5.6 |
ATGTAAACACTTGTTTGATT |
|
VC1046 |
fadI |
69 |
5.7 |
ATTtAAACggcTGTTTGAtT |
|
VC2758 |
fadB |
-136 |
5.5 |
TGTTAAACACTTGTTTAAAA |
|
VC1741 |
psrA |
16 |
5.5 |
TTTCAAACAGTTGTTTGATA |
|
VC1985 |
fadD |
-130 |
5.6 |
ATTTAAACAAGTGTTTGAGA |
|
VC0734 |
mdh |
-299 |
5.7 |
ATTTAAACACTTGTTTAAGT |
|
Vibrio vulnificus CMCP6
|
|
VV1_3132 |
fadH |
-77 |
5.4 |
ATGTAAACGCATGTTTGATT |
|
VV1_1975 |
fadI |
-78 |
5.7 |
ATTTAAACGCATGTTTGATA |
|
VV1_0981 |
fadB |
-169 |
5.5 |
TGTTAAACACTTGTTTAAAA |
|
VV1_2832 |
psrA |
-32 |
5.5 |
TTTCAAACAGTTGTTTGATA |
|
VV1_0136 |
fadD |
-127 |
5.6 |
ATTTAAACAAGTGTTTGAGA |
|
VV1_0450 |
mdh |
-270 |
5.2 |
AATCAAGCACTTGTTTGAAA |
|
Vibrio harveyi ATCC BAA-1116
|
|
VIBHAR_03043 |
fadH |
-78 |
4.9 |
ATGTAAACGGCTGTTTGATC |
|
VIBHAR_03121 |
fadI |
-78 |
5.7 |
ATTTAAACGCATGTTTGATA |
|
VIBHAR_00460 |
fadB |
-186 |
5.5 |
TGTTAAACACTTGTTTAAAA |
|
VIBHAR_02639 |
psrA |
-32 |
5.5 |
TTTCAAACAGTTGTTTAATA |
|
VIBHAR_01379 |
fadD |
-112 |
5.6 |
ATTTAAACAAGTGTTTGAGA |
|
VIBHAR_01041 |
mdh |
-348 |
5.6 |
ATTCATACACTTGTTTAAAT |
|
VIBHAR_01041 |
mdh |
-265 |
5.6 |
AATCAAACACTTGTTTGATA |
|
Vibrio parahaemolyticus RIMD 2210633
|
|
VP2151 |
fadH |
-87 |
5.5 |
ATGTAAACACCTGTTTGATT |
|
VP2209 |
fadI |
-78 |
5.6 |
ATTTAAACGCACGTTTGATA |
|
VP0030 |
fadB |
-175 |
5.5 |
TGTTAAACACTTGTTTAAAA |
|
VP1229 |
psrA |
-32 |
5.5 |
TTTCAAACAGTTGTTTAATA |
|
VP0870 |
fadD |
-112 |
5.6 |
ATTTAAACAAGTGTTTGAGA |
|
VP0583 |
mdh |
-348 |
5.2 |
ATTCATACACCTGTTTTAAA |
|
Vibrio shilonii AK1
|
|
VSAK1_03494 |
fadH |
-82 |
4.9 |
ATGTAAACGCTAGTTTGATT |
|
VSAK1_03244 |
fadI |
-74 |
5.4 |
TATTAAACGACTGTTTTAAA |
|
VSAK1_12702 |
fadB |
-136 |
5.5 |
TGTTAAACAGTTGTTTAAAA |
|
VSAK1_06350 |
psrA |
-32 |
5.6 |
ATTCAAACATGTGTTTGATA |
|
VSAK1_09078 |
fadD |
-174 |
5.5 |
AATTAAACAAGTGTTTGAGT |
|
Vibrio splendidus LGP32
|
|
VS_0938 |
fadH |
-72 |
5.1 |
ATGTAAACGGTTGTTTGAAC |
|
VS_0864 |
fadI |
-78 |
5.8 |
ATTTAAACGCCTGTTTGATT |
|
VS_0041 |
fadB |
-147 |
5.5 |
TGTTAAACAATTGTTTAAAA |
|
VS_1841 |
psrA |
-23 |
5.5 |
TTTCAAACAGTTGTTTAATA |
|
VS_2220 |
fadD |
-112 |
5.1 |
ATTTAAACAAGTGTTTGAGC |
|
Vibrio angustum S14
|
|
VAS14_05978 |
fadH |
-76 |
5.5 |
ATGTAAACAAATGTTTGAAA |
|
VAS14_22297 |
fadB |
-132 |
5.4 |
TGTTAAACAAATGTTTAAAT |
|
VAS14_00861 |
psrA |
-33 |
5.7 |
ATTTAAACATGTGTTTAATA |
|
VAS14_17336 |
fadI |
-114 |
5.4 |
ATTTAAACACTTGATTGAAT |
|
VAS14_17861 |
fadD |
-88 |
5.5 |
ATATAAACGCTTGTTTGATT |
|
VAS14_14924 |
fadD |
-215 |
5.3 |
TTTCATACAAGTGTTTAAAA |
|
Photobacterium profundum SS9
|
|
PBPRA2594 |
fadH |
-76 |
5.5 |
ATGTAAACAAATGTTTGAAA |
|
PBPRA0064 |
fadB |
-115 |
4.9 |
TTTTAAATAAGTGTTGAAAT |
|
PBPRA0961 |
fadI |
-135 |
5.7 |
AATAAAACATTTGTTTGAAA |
|
PBPRB0510 |
fadD |
-179 |
5.4 |
AATTATACACTCGTTTAAAA |
|
PBPRA2573 |
fadL2 |
-355 |
5.5 |
TTTAAAACGGTTGTTTTAAA |
|
PBPRA2339 |
SO3908 |
-69 |
5.5 |
AGTTAAACGTATGTTTGAAT |
|
PBPRA2573 |
fadL2 |
-373 |
5.1 |
TTCTAAACGCCCGTTTTATT |
|
PBPRA0064 |
fadB |
-128 |
5 |
GGTTAAACAATTGTTTTAAA |
Export
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Regulatory Sites
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