Regulon of Rex in Chloroflexus sp. Y-400-fl
| Regulator type: | Transcription factor |
| TF locus tag: | Chy400_3940 |
| Regulator family: | Rex |
| Regulation mode: | repressor |
| Biological process: | Energy metabolism |
| Effector: | NADH |
| Regulog: | Rex - Chloroflexia |
| Statistics of regulated genes: | |
| - Genes | 29 |
| - Operons | 10 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - Rex
- By taxonomy - Chloroflexi
- By TF family - Rex
- By effector - NADH
- By pathway - Energy metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -54
Score: 5.2 Sequence: TTGTGATATACTTCTCAT
Locus tag: Chy400_2142
Name: nuoA Funciton: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
Locus tag: Chy400_2141
Name: nuoB Funciton: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
Locus tag: Chy400_2140
Name: nuoC Funciton: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
Locus tag: Chy400_2139
Name: nuoD Funciton: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
Locus tag: Chy400_2138
Name: nuoI Funciton: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
Locus tag: Chy400_2137
Name: nuoH Funciton: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
Locus tag: Chy400_2136
Name: nuoJ Funciton: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
Locus tag: Chy400_2135
Name: nuoK Funciton: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
Locus tag: Chy400_2134
Name: nuoL Funciton: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
Locus tag: Chy400_2133
Name: nuoM1 Funciton: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
Locus tag: Chy400_2132
Name: nuoM2 Funciton: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
Locus tag: Chy400_2131
Name: nuoN Funciton: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
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nuoA
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NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
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nuoB
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NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
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nuoC
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NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
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nuoD
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NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
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nuoI
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NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
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nuoH
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NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
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nuoJ
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NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
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nuoK
|
NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
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nuoL
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NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
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nuoM1
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NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
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nuoM2
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NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
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nuoN
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NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
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Position: -61
Score: 4.5 Sequence: CTGTGCTGTAAATCACAA
Locus tag: Chy400_1671
Name: fpr Funciton: Ferredoxin--NADP(+) reductase (EC 1.18.1.2) |
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fpr
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Ferredoxin--NADP(+) reductase (EC 1.18.1.2)
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Position: -250
Score: 5.2 Sequence: ACGTGATATTTATCACAA
Locus tag: Chy400_3880
Name: nuoM3 Funciton: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) |
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nuoM3
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NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
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Position: -33
Score: 5.3 Sequence: TTGTGAATGATTTCACTA
Locus tag: Chy400_3620
Name: ndh Funciton: NADH dehydrogenase (EC 1.6.99.3) |
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ndh
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NADH dehydrogenase (EC 1.6.99.3)
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Position: -54
Score: 5.4 Sequence: TTGTTATCTATATCACAA
Locus tag: Chy400_0662
Name: acs Funciton: Acetyl-coenzyme A synthetase (EC 6.2.1.1) |
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acs
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Acetyl-coenzyme A synthetase (EC 6.2.1.1)
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Position: -63
Score: 4.8 Sequence: ATGTGGTATATTTCACAC
Locus tag: Chy400_1583
Name: Cagg_1949 Funciton: GCN5-related N-acetyltransferase |
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Cagg_1949
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GCN5-related N-acetyltransferase
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Position: -109
Score: 4 Sequence: TTGTGAAAGATCGAACAA
Locus tag: Chy400_3293
Name: atpB Funciton: ATP synthase A chain (EC 3.6.3.14)
Locus tag: Chy400_3292
Name: atpE Funciton: ATP synthase C chain (EC 3.6.3.14)
Locus tag: Chy400_3291
Name: atpF Funciton: ATP synthase B chain (EC 3.6.3.14)
Locus tag: Chy400_3290
Name: atpH Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: Chy400_3289
Name: atpA Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: Chy400_3288
Name: atpG Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: Chy400_3287
Name: atpD Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: Chy400_3286
Name: atpC Funciton: ATP synthase epsilon chain (EC 3.6.3.14) |
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atpB
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ATP synthase A chain (EC 3.6.3.14)
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atpE
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ATP synthase C chain (EC 3.6.3.14)
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atpF
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ATP synthase B chain (EC 3.6.3.14)
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atpH
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ATP synthase delta chain (EC 3.6.3.14)
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atpA
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ATP synthase alpha chain (EC 3.6.3.14)
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atpG
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ATP synthase gamma chain (EC 3.6.3.14)
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atpD
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ATP synthase beta chain (EC 3.6.3.14)
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atpC
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ATP synthase epsilon chain (EC 3.6.3.14)
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Position: -123
Score: 5.7 Sequence: TTGTGGTGAATATCACAA
Locus tag: Chy400_4040
Name: hepT Funciton: Heptaprenyl diphosphate synthase component II (EC 2.5.1.30) |
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hepT
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Heptaprenyl diphosphate synthase component II (EC 2.5.1.30)
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Position: -55
Score: 4.7 Sequence: TTGTGCTACACTTCACAT
Locus tag: Chy400_3940
Name: rex Funciton: Redox-sensitive transcriptional regulator Rex |
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rex
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Redox-sensitive transcriptional regulator Rex
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Position: -34
Score: 4.1 Sequence: TCGTGAAAGAATCCACGA
Locus tag: Chy400_0034
Name: null Funciton: hypothetical protein
Locus tag: Chy400_0033
Name: ctaB Funciton: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) |
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hypothetical protein
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ctaB
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Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |