Regulon of Rex in Chloroflexus sp. Y-400-fl

Properties
Regulator type:	Transcription factor
TF locus tag:	Chy400_3940
Regulator family:	Rex
Regulation mode:	repressor
Biological process:	Energy metabolism
Effector:	NADH
Regulog:	Rex - Chloroflexia
Statistics of regulated genes:
- Genes	29
- Operons	10
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 49 sites [see more]

Member of regulog collections

By trascription factor - Rex
By taxonomy - Chloroflexi
By TF family - Rex
By effector - NADH
By pathway - Energy metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -54 Score: 5.2 Sequence: TTGTGATATACTTCTCAT Locus tag: Chy400_2142 Name: nuoA Funciton: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) Locus tag: Chy400_2141 Name: nuoB Funciton: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) Locus tag: Chy400_2140 Name: nuoC Funciton: NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) Locus tag: Chy400_2139 Name: nuoD Funciton: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) Locus tag: Chy400_2138 Name: nuoI Funciton: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) Locus tag: Chy400_2137 Name: nuoH Funciton: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) Locus tag: Chy400_2136 Name: nuoJ Funciton: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) Locus tag: Chy400_2135 Name: nuoK Funciton: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) Locus tag: Chy400_2134 Name: nuoL Funciton: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) Locus tag: Chy400_2133 Name: nuoM1 Funciton: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) Locus tag: Chy400_2132 Name: nuoM2 Funciton: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) Locus tag: Chy400_2131 Name: nuoN Funciton: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
	Chy400_2142	nuoA	NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
	Chy400_2141	nuoB	NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
	Chy400_2140	nuoC	NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3)
	Chy400_2139	nuoD	NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
	Chy400_2138	nuoI	NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
	Chy400_2137	nuoH	NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
	Chy400_2136	nuoJ	NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
	Chy400_2135	nuoK	NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
	Chy400_2134	nuoL	NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
	Chy400_2133	nuoM1	NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
	Chy400_2132	nuoM2	NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
	Chy400_2131	nuoN	NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
Position: -61 Score: 4.5 Sequence: CTGTGCTGTAAATCACAA Locus tag: Chy400_1671 Name: fpr Funciton: Ferredoxin--NADP(+) reductase (EC 1.18.1.2)
	Chy400_1671	fpr	Ferredoxin--NADP(+) reductase (EC 1.18.1.2)
Position: -250 Score: 5.2 Sequence: ACGTGATATTTATCACAA Locus tag: Chy400_3880 Name: nuoM3 Funciton: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
	Chy400_3880	nuoM3	NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
Position: -33 Score: 5.3 Sequence: TTGTGAATGATTTCACTA Locus tag: Chy400_3620 Name: ndh Funciton: NADH dehydrogenase (EC 1.6.99.3)
	Chy400_3620	ndh	NADH dehydrogenase (EC 1.6.99.3)
Position: -54 Score: 5.4 Sequence: TTGTTATCTATATCACAA Locus tag: Chy400_0662 Name: acs Funciton: Acetyl-coenzyme A synthetase (EC 6.2.1.1)
	Chy400_0662	acs	Acetyl-coenzyme A synthetase (EC 6.2.1.1)
Position: -63 Score: 4.8 Sequence: ATGTGGTATATTTCACAC Locus tag: Chy400_1583 Name: Cagg_1949 Funciton: GCN5-related N-acetyltransferase
	Chy400_1583	Cagg_1949	GCN5-related N-acetyltransferase
Position: -109 Score: 4 Sequence: TTGTGAAAGATCGAACAA Locus tag: Chy400_3293 Name: atpB Funciton: ATP synthase A chain (EC 3.6.3.14) Locus tag: Chy400_3292 Name: atpE Funciton: ATP synthase C chain (EC 3.6.3.14) Locus tag: Chy400_3291 Name: atpF Funciton: ATP synthase B chain (EC 3.6.3.14) Locus tag: Chy400_3290 Name: atpH Funciton: ATP synthase delta chain (EC 3.6.3.14) Locus tag: Chy400_3289 Name: atpA Funciton: ATP synthase alpha chain (EC 3.6.3.14) Locus tag: Chy400_3288 Name: atpG Funciton: ATP synthase gamma chain (EC 3.6.3.14) Locus tag: Chy400_3287 Name: atpD Funciton: ATP synthase beta chain (EC 3.6.3.14) Locus tag: Chy400_3286 Name: atpC Funciton: ATP synthase epsilon chain (EC 3.6.3.14)
	Chy400_3293	atpB	ATP synthase A chain (EC 3.6.3.14)
	Chy400_3292	atpE	ATP synthase C chain (EC 3.6.3.14)
	Chy400_3291	atpF	ATP synthase B chain (EC 3.6.3.14)
	Chy400_3290	atpH	ATP synthase delta chain (EC 3.6.3.14)
	Chy400_3289	atpA	ATP synthase alpha chain (EC 3.6.3.14)
	Chy400_3288	atpG	ATP synthase gamma chain (EC 3.6.3.14)
	Chy400_3287	atpD	ATP synthase beta chain (EC 3.6.3.14)
	Chy400_3286	atpC	ATP synthase epsilon chain (EC 3.6.3.14)
Position: -123 Score: 5.7 Sequence: TTGTGGTGAATATCACAA Locus tag: Chy400_4040 Name: hepT Funciton: Heptaprenyl diphosphate synthase component II (EC 2.5.1.30)
	Chy400_4040	hepT	Heptaprenyl diphosphate synthase component II (EC 2.5.1.30)
Position: -55 Score: 4.7 Sequence: TTGTGCTACACTTCACAT Locus tag: Chy400_3940 Name: rex Funciton: Redox-sensitive transcriptional regulator Rex
	Chy400_3940	rex	Redox-sensitive transcriptional regulator Rex
Position: -34 Score: 4.1 Sequence: TCGTGAAAGAATCCACGA Locus tag: Chy400_0034 Name: null Funciton: hypothetical protein Locus tag: Chy400_0033 Name: ctaB Funciton: Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-)
	Chy400_0034		hypothetical protein
	Chy400_0033	ctaB	Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-)

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of Rex in Chloroflexus sp. Y-400-fl

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --