Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LiuR in Brucella melitensis 16M

Properties
Regulator type: Transcription factor
TF locus tag: BMEII0467, BMEI0808
Regulator family: MerR
Regulation mode: repressor
Biological process: Branched-chain amino acid degradation
Effector:
Regulog: LiuR - Rhizobiales
Statistics of regulated genes:
- Genes 20
- Operons 10
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 84 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: 37
Score: 5
Sequence: TATTACGTAAACGTAAGA
Locus tag: BMEI1371
Name: SMc00041
Funciton: hypothetical protein
BMEI1371
SMc00041
hypothetical protein
Position: -112
Score: 5.8
Sequence: ATTGACGTTTACGTAATA
Locus tag: BMEI1521
Name: acdH2
Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
Locus tag: BMEI1522
Name: echH
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
BMEI1521
acdH2
Acyl-CoA dehydrogenase (EC 1.3.99.3)
BMEI1522
echH
Enoyl-CoA hydratase (EC 4.2.1.17)
Position: 10
Score: 5.5
Sequence: TATTACGTTTACGGAAAC
Locus tag: BMEII0460
Name: PF03060
Funciton: Dioxygenases related to 2-nitropropane dioxygenase
BMEII0460
PF03060
Dioxygenases related to 2-nitropropane dioxygenase
Position: -179
Score: 6
Sequence: TCTTACGTTTACGTAAGA
Locus tag: BMEI0137
Name: mdh
Funciton: Malate dehydrogenase (EC 1.1.1.37)
Locus tag: BMEI0138
Name: sucC
Funciton: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: BMEI0139
Name: sucD
Funciton: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Locus tag: BMEI0140
Name: sucA
Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: BMEI0141
Name: sucB
Funciton: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
BMEI0137
mdh
Malate dehydrogenase (EC 1.1.1.37)
BMEI0138
sucC
Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
BMEI0139
sucD
Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
BMEI0140
sucA
2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
BMEI0141
sucB
Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Position: -176
Score: 5.3
Sequence: ATTGACGTGCACGTCAAC
Locus tag: BMEI0096
Name: etfB
Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: BMEI0097
Name: etfA
Funciton: Electron transfer flavoprotein, alpha subunit
Locus tag: BMEI0098
Name: null
Funciton: hypothetical protein
Locus tag: BMEI0099
Name: hbdA
Funciton: 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
BMEI0096
etfB
Electron transfer flavoprotein, beta subunit
BMEI0097
etfA
Electron transfer flavoprotein, alpha subunit
BMEI0098
hypothetical protein
BMEI0099
hbdA
3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157)
Position: -84
Score: 5.4
Sequence: ATTTACCTTTACGTAAAT
Locus tag: BMEI0304
Name: null
Funciton: Hypothetical Cytosolic Protein
BMEI0304
Hypothetical Cytosolic Protein
Position: -154
Score: 5.2
Sequence: GTTTACGTTTACGTTTGC
Position: -148
Score: 5.5
Sequence: GTTTACGTTTGCGTAAGC
Locus tag: BMEI1315
Name: PF09917
Funciton: Protein of unknown function, PF09917
BMEI1315
PF09917
Protein of unknown function, PF09917
Position: -244
Score: 6
Sequence: TTTGACGTTTACGTTAAG
Position: -238
Score: 5.3
Sequence: GTTTACGTTAAGGTAAAA
Locus tag: BMEI1320
Name: etfD
Funciton: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
BMEI1320
etfD
Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
Position: -193
Score: 6.1
Sequence: TTTGACGTTTACGGAAAC
Position: -187
Score: 4.6
Sequence: GTTTACGGAAACGTCAAA
Locus tag: BMEII0495
Name: acdH
Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
Locus tag: BMEII0496
Name: acdA
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Locus tag: BMEII0497
Name: acdB
Funciton: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
BMEII0495
acdH
Acyl-CoA dehydrogenase (EC 1.3.99.3)
BMEII0496
acdA
3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
BMEII0497
acdB
Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
Position: -65
Score: 5.3
Sequence: ATTGACTTTTACGTAAAT
Locus tag: BMEI0808
Name: liuR1
Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
BMEI0808
liuR1
Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD
© 2009-2020 RegPrecise