Regulon of LiuR in Mesorhizobium sp. BNC1

Properties
Regulator type:	Transcription factor
TF locus tag:	Meso_0024, Meso_1259
Regulator family:	MerR
Regulation mode:	repressor
Biological process:	Branched-chain amino acid degradation
Effector:
Regulog:	LiuR - Rhizobiales
Statistics of regulated genes:
- Genes	11
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 84 sites [see more]

Member of regulog collections

By trascription factor - LiuR
By taxonomy - Rhizobiales
By TF family - MerR
By pathway - Branched-chain amino acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -93 Score: 5.9 Sequence: TTTGACCTTTACGTAAGC Locus tag: Meso_0723 Name: acdH2 Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
	Meso_0723	acdH2	Acyl-CoA dehydrogenase (EC 1.3.99.3)
Position: -182 Score: 4.6 Sequence: GCTTACCCTTACGTAAAT Locus tag: Meso_3395 Name: mdh Funciton: Malate dehydrogenase (EC 1.1.1.37) Locus tag: Meso_3396 Name: sucC Funciton: Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) Locus tag: Meso_3397 Name: sucD Funciton: Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) Locus tag: Meso_3398 Name: sucA Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Locus tag: Meso_3399 Name: sucB Funciton: Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
	Meso_3395	mdh	Malate dehydrogenase (EC 1.1.1.37)
	Meso_3396	sucC	Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
	Meso_3397	sucD	Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
	Meso_3398	sucA	2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
	Meso_3399	sucB	Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Position: -77 Score: 5.2 Sequence: TTTGACGTTTACGCGCAC Locus tag: Meso_0023 Name: acdH Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3) Locus tag: Meso_0022 Name: acdA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) Locus tag: Meso_0021 Name: acdB Funciton: Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) Locus tag: Meso_0020 Name: null Funciton: Predicted thioesterase
	Meso_0023	acdH	Acyl-CoA dehydrogenase (EC 1.3.99.3)
	Meso_0022	acdA	3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
	Meso_0021	acdB	Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
	Meso_0020		Predicted thioesterase
Position: -63 Score: 5.2 Sequence: ATTGACTTTTACGTAATC Locus tag: Meso_1259 Name: liuR1 Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
	Meso_1259	liuR1	Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD