Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LiuR in Thauera sp. MZ1T

Properties
Regulator type: Transcription factor
TF locus tag: Tmz1t_2996
Regulator family: MerR
Regulation mode: repressor
Biological process: Branched-chain amino acid degradation
Effector:
Regulog: LiuR - Various betaproteobacteria
Statistics of regulated genes:
- Genes 18
- Operons 6
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 31 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -84
Score: 5.7
Sequence: ATTGACGCCTACGTCAAC
Locus tag: Tmz1t_1274
Name: paaH
Funciton: Short-chain dehydrogenase/reductase SDR
Tmz1t_1274
paaH
Short-chain dehydrogenase/reductase SDR
Position: -84
Score: 5
Sequence: GTTAACGTCAACGTAAAA
Locus tag: Tmz1t_1162
Name: acsA
Funciton: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Tmz1t_1162
acsA
Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
Position: -66
Score: 5.3
Sequence: GTTGACGTTAACGTTGCC
Locus tag: Tmz1t_2272
Name: ebA6516
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17)
Tmz1t_2272
ebA6516
Enoyl-CoA hydratase (EC 4.2.1.17)
Position: -159
Score: 5.2
Sequence: GTTTACGTTGACGCAAAC
Position: -153
Score: 5.5
Sequence: GTTGACGCAAACGTCAAT
Position: -33
Score: 5.9
Sequence: GTTGACGCGAACGTAAAC
Locus tag: Tmz1t_2954
Name: null
Funciton: 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase
Locus tag: Tmz1t_2953
Name: badI
Funciton: 2-ketocyclohexanecarboxyl-CoA hydrolase (EC 4.1.3.36)
Locus tag: Tmz1t_2952
Name: null
Funciton: cyclohexa-1,5-dienecarbonyl-CoA hydratase
Locus tag: Tmz1t_2951
Name: null
Funciton: benzoyl-CoA reductase, subunit C
Locus tag: Tmz1t_2950
Name: null
Funciton: benzoyl-CoA reductase, subunit B
Locus tag: Tmz1t_2949
Name: null
Funciton: benzoyl-CoA reductase, subunit A
Locus tag: Tmz1t_2948
Name: null
Funciton: benzoyl-CoA reductase, subunit D
Locus tag: Tmz1t_2947
Name: null
Funciton: 4Fe-4S ferredoxin iron-sulfur binding domain protein
Locus tag: Tmz1t_2946
Name: null
Funciton: GCN5-related N-acetyltransferase
Locus tag: Tmz1t_2945
Name: null
Funciton: GCN5-related N-acetyltransferase
Tmz1t_2954
6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase
Tmz1t_2953
badI
2-ketocyclohexanecarboxyl-CoA hydrolase (EC 4.1.3.36)
Tmz1t_2952
cyclohexa-1,5-dienecarbonyl-CoA hydratase
Tmz1t_2951
benzoyl-CoA reductase, subunit C
Tmz1t_2950
benzoyl-CoA reductase, subunit B
Tmz1t_2949
benzoyl-CoA reductase, subunit A
Tmz1t_2948
benzoyl-CoA reductase, subunit D
Tmz1t_2947
4Fe-4S ferredoxin iron-sulfur binding domain protein
Tmz1t_2946
GCN5-related N-acetyltransferase
Tmz1t_2945
GCN5-related N-acetyltransferase
Position: -59
Score: 5.5
Sequence: GATTACGTTAACGTTAAC
Locus tag: Tmz1t_0730
Name: paaI
Funciton: Phenylacetic acid degradation-related protein
Locus tag: Tmz1t_0731
Name: cah
Funciton: Carbonic anhydrase (EC 4.2.1.1)
Locus tag: Tmz1t_0732
Name: ivdA
Funciton: Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
Locus tag: Tmz1t_0733
Name: ivdC
Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Tmz1t_0730
paaI
Phenylacetic acid degradation-related protein
Tmz1t_0731
cah
Carbonic anhydrase (EC 4.2.1.1)
Tmz1t_0732
ivdA
Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
Tmz1t_0733
ivdC
Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Position: -135
Score: 6.2
Sequence: GTTGACGTTTACGTTAGC
Locus tag: Tmz1t_2996
Name: liuR
Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Tmz1t_2996
liuR
Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
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