Regulon of LiuR in Variovorax paradoxus S110

Properties
Regulator type:	Transcription factor
TF locus tag:	Vapar_4735
Regulator family:	MerR
Regulation mode:	repressor
Biological process:	Branched-chain amino acid degradation
Effector:
Regulog:	LiuR - Comamonadaceae
Statistics of regulated genes:
- Genes	6
- Operons	1
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 59 sites [see more]

Member of regulog collections

By trascription factor - LiuR
By taxonomy - Comamonadaceae
By TF family - MerR
By pathway - Branched-chain amino acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -115 Score: 6.6 Sequence: ATTGACGTTTACGTAAAC Locus tag: Vapar_4735 Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family Locus tag: Vapar_4734 Name: cah Funciton: Carbonic anhydrase (EC 4.2.1.1) Locus tag: Vapar_4733 Name: aceK Funciton: Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-) Locus tag: Vapar_4732 Name: ivdA Funciton: Acetyl-CoA C-acyltransferase (EC 2.3.1.16) Locus tag: Vapar_4731 Name: null Funciton: peptidase M20 Locus tag: Vapar_4730 Name: ivdC Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
	Vapar_4735	liuR	Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
	Vapar_4734	cah	Carbonic anhydrase (EC 4.2.1.1)
	Vapar_4733	aceK	Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)
	Vapar_4732	ivdA	Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
	Vapar_4731		peptidase M20
	Vapar_4730	ivdC	Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD