Regulon of LiuR in Acidovorax sp. JS42

Properties
Regulator type:	Transcription factor
TF locus tag:	Ajs_3780
Regulator family:	MerR
Regulation mode:	repressor
Biological process:	Branched-chain amino acid degradation
Effector:
Regulog:	LiuR - Comamonadaceae
Statistics of regulated genes:
- Genes	11
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 59 sites [see more]

Member of regulog collections

By trascription factor - LiuR
By taxonomy - Comamonadaceae
By TF family - MerR
By pathway - Branched-chain amino acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -134 Score: 6.6 Sequence: ATTGACGTTTACGTAAAC Position: -128 Score: 4.8 Sequence: GTTTACGTAAACGTAATA Locus tag: Ajs_3779 Name: liuA Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2) Locus tag: Ajs_3778 Name: cah Funciton: Carbonic anhydrase (EC 4.2.1.1) Locus tag: Ajs_3777 Name: aceK Funciton: Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-) Locus tag: Ajs_3776 Name: ivdA Funciton: Acetyl-CoA C-acyltransferase (EC 2.3.1.16) Locus tag: Ajs_3775 Name: null Funciton: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Locus tag: Ajs_3774 Name: ivdC Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
	Ajs_3779	liuA	Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
	Ajs_3778	cah	Carbonic anhydrase (EC 4.2.1.1)
	Ajs_3777	aceK	Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)
	Ajs_3776	ivdA	Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
	Ajs_3775		Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
	Ajs_3774	ivdC	Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Position: -59 Score: 6 Sequence: ATTGACGTTCACGTCAAC Locus tag: Ajs_3780 Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
	Ajs_3780	liuR	Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
Position: -45 Score: 5.1 Sequence: GTTTACGTAAACGTCAAG Locus tag: Ajs_2810 Name: etfB Funciton: Electron transfer flavoprotein, beta subunit Locus tag: Ajs_2809 Name: etfA Funciton: Electron transfer flavoprotein, alpha subunit Locus tag: Ajs_2808 Name: acdH Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
	Ajs_2810	etfB	Electron transfer flavoprotein, beta subunit
	Ajs_2809	etfA	Electron transfer flavoprotein, alpha subunit
	Ajs_2808	acdH	Acyl-CoA dehydrogenase (EC 1.3.99.3)
Position: -37 Score: 6.1 Sequence: ATTAACGTTTACGTTAAC Position: -31 Score: 5.3 Sequence: GTTTACGTTAACGTAACT Locus tag: Ajs_1606 Name: paaH Funciton: 3-hydroxyacyl-CoA dehydrogenase
	Ajs_1606	paaH	3-hydroxyacyl-CoA dehydrogenase

Export
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	Regulatory Sites	[ FASTA format ]	DOWNLOAD