Regulon of LiuR in Burkholderia phymatum STM815

Properties
Regulator type:	Transcription factor
TF locus tag:	Bphy_0181
Regulator family:	MerR
Regulation mode:	repressor
Biological process:	Branched-chain amino acid degradation
Effector:
Regulog:	LiuR - Burkholderia
Statistics of regulated genes:
- Genes	12
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 6 sites [see more]

Member of regulog collections

By trascription factor - LiuR
By taxonomy - Burkholderia
By TF family - MerR
By pathway - Branched-chain amino acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -101 Score: 6 Sequence: GTTGACGATAACGTAAAC Locus tag: Bphy_0181 Name: liuR Funciton: Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family Locus tag: Bphy_0180 Name: aceK Funciton: Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-) Locus tag: Bphy_0179 Name: cah Funciton: Carbonic anhydrase (EC 4.2.1.1) Locus tag: Bphy_0178 Name: ivdA Funciton: Acetyl-CoA C-acyltransferase (EC 2.3.1.16) Locus tag: Bphy_0177 Name: null Funciton: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Locus tag: Bphy_0176 Name: ivdC Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10) Locus tag: Bphy_0175 Name: null Funciton: hypothetical protein
	Bphy_0181	liuR	Predicted transcriptional regulator LiuR of leucine degradation pathway, MerR family
	Bphy_0180	aceK	Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)
	Bphy_0179	cah	Carbonic anhydrase (EC 4.2.1.1)
	Bphy_0178	ivdA	Acetyl-CoA C-acyltransferase (EC 2.3.1.16)
	Bphy_0177		Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
	Bphy_0176	ivdC	Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)
	Bphy_0175		hypothetical protein
Position: -187 Score: 5.6 Sequence: ATTGACGCATACGTCAAT Locus tag: Bphy_3562 Name: liuA Funciton: Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2) Locus tag: Bphy_3561 Name: liuB Funciton: Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) Locus tag: Bphy_3560 Name: liuC Funciton: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) Locus tag: Bphy_3559 Name: liuD Funciton: Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
	Bphy_3562	liuA	Isovaleryl-CoA dehydrogenase (EC 1.3.99.10); Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
	Bphy_3561	liuB	Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)
	Bphy_3560	liuC	Methylglutaconyl-CoA hydratase (EC 4.2.1.18)
	Bphy_3559	liuD	Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)
Position: -153 Score: 5.4 Sequence: CTTGACGTTTACGGAAAG Locus tag: Bphy_3025 Name: aacS Funciton: Acetoacetyl-CoA synthetase [leucine] (EC 6.2.1.16)
	Bphy_3025	aacS	Acetoacetyl-CoA synthetase [leucine] (EC 6.2.1.16)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD