Regulon of LexA in Vibrio angustum S14
| Regulator type: | Transcription factor |
| TF locus tag: | VAS14_21837 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Vibrionales |
| Statistics of regulated genes: | |
| - Genes | 17 |
| - Operons | 13 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - LexA
- By taxonomy - Vibrionales
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -86
Score: 5.6 Sequence: AACTGGTTTTATATCCAGTA
Locus tag: VAS14_05738
Name: topB Funciton: DNA topoisomerase III (EC 5.99.1.2) |
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topB
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DNA topoisomerase III (EC 5.99.1.2)
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Position: -73
Score: 5.3 Sequence: AGCTGGACATTTATCCAGTA
Locus tag: VAS14_22754
Name: rmuC Funciton: DNA recombination protein RmuC |
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rmuC
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DNA recombination protein RmuC
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Position: -64
Score: 5.2 Sequence: TACTGGTTATGGATACAGTA
Position: -42
Score: 5.5 Sequence: TACTGTATGTAAAAACAGGT
Locus tag: VAS14_07144
Name: recN Funciton: DNA repair protein RecN |
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recN
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DNA repair protein RecN
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Position: -165
Score: 5 Sequence: GCCTGTCTATTTAAACAGTT
Locus tag: VAS14_07584
Name: mutH Funciton: DNA mismatch repair endonuclease MutH |
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mutH
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DNA mismatch repair endonuclease MutH
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Position: -55
Score: 4.5 Sequence: TACTGTGTTTTTATCCATGT
Locus tag: VAS14_07634
Name: xerD Funciton: Site-specific recombinase XerD
Locus tag: VAS14_07629
Name: dsbC Funciton: Thiol:disulfide interchange protein
Locus tag: VAS14_07624
Name: recJ Funciton: Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) |
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xerD
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Site-specific recombinase XerD
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dsbC
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Thiol:disulfide interchange protein
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recJ
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Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)
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Position: -10
Score: 5.9 Sequence: AACTGTATAAATGTACAGTT
Locus tag: VAS14_12359
Name: umuD Funciton: DNA polymerase V, subunit UmuD
Locus tag: VAS14_12354
Name: umuC Funciton: DNA polymerase V, subunit UmuC |
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umuD
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DNA polymerase V, subunit UmuD
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umuC
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DNA polymerase V, subunit UmuC
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Position: -30
Score: 5.7 Sequence: AGCTGTATGTATAAACAGTA
Locus tag: VAS14_16776
Name: dinB Funciton: DNA polymerase IV (EC 2.7.7.7) |
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dinB
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DNA polymerase IV (EC 2.7.7.7)
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Position: -78
Score: 5.7 Sequence: CACTGTATGAATAGACAGTA
Locus tag: VAS14_20496
Name: recA Funciton: Recombinase A |
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recA
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Recombinase A
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Position: -45
Score: 5.1 Sequence: CACTGGATATACTCACAGTG
Position: -25
Score: 5.6 Sequence: AACTGTATAAAAAGACAGGT
Locus tag: VAS14_21837
Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88) |
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lexA
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SOS-response repressor and protease LexA (EC 3.4.21.88)
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Position: -66
Score: 5.4 Sequence: AACTGGATGTCTATCCAGTT
Locus tag: VAS14_18066
Name: ruvA Funciton: Holliday junction DNA helicase RuvA
Locus tag: VAS14_18071
Name: ruvB Funciton: Holliday junction DNA helicase RuvB |
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ruvA
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Holliday junction DNA helicase RuvA
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ruvB
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Holliday junction DNA helicase RuvB
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Position: -87
Score: 5 Sequence: TACTGTGTTTTTACTCAGTA
Locus tag: VAS14_19446
Name: uvrA Funciton: Excinuclease ABC subunit A |
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uvrA
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Excinuclease ABC subunit A
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Position: -27
Score: 5.4 Sequence: CATTGTATAAATAACCAGTA
Locus tag: VAS14_22899
Name: uvrD Funciton: ATP-dependent DNA helicase II |
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uvrD
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ATP-dependent DNA helicase II
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Position: -44
Score: 6 Sequence: TACTGTATAAACAGCCAGTA
Locus tag: VAS14_20761
Name: yebG Funciton: SOS regulon DNA damage-inducible protein |
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yebG
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SOS regulon DNA damage-inducible protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |