Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of LexA in Vibrio angustum S14

Properties
Regulator type: Transcription factor
TF locus tag: VAS14_21837
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Regulog: LexA - Vibrionales
Statistics of regulated genes:
- Genes 17
- Operons 13
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 186 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -86
Score: 5.6
Sequence: AACTGGTTTTATATCCAGTA
Locus tag: VAS14_05738
Name: topB
Funciton: DNA topoisomerase III (EC 5.99.1.2)
VAS14_05738
topB
DNA topoisomerase III (EC 5.99.1.2)
Position: -73
Score: 5.3
Sequence: AGCTGGACATTTATCCAGTA
Locus tag: VAS14_22754
Name: rmuC
Funciton: DNA recombination protein RmuC
VAS14_22754
rmuC
DNA recombination protein RmuC
Position: -64
Score: 5.2
Sequence: TACTGGTTATGGATACAGTA
Position: -42
Score: 5.5
Sequence: TACTGTATGTAAAAACAGGT
Locus tag: VAS14_07144
Name: recN
Funciton: DNA repair protein RecN
VAS14_07144
recN
DNA repair protein RecN
Position: -165
Score: 5
Sequence: GCCTGTCTATTTAAACAGTT
Locus tag: VAS14_07584
Name: mutH
Funciton: DNA mismatch repair endonuclease MutH
VAS14_07584
mutH
DNA mismatch repair endonuclease MutH
Position: -55
Score: 4.5
Sequence: TACTGTGTTTTTATCCATGT
Locus tag: VAS14_07634
Name: xerD
Funciton: Site-specific recombinase XerD
Locus tag: VAS14_07629
Name: dsbC
Funciton: Thiol:disulfide interchange protein
Locus tag: VAS14_07624
Name: recJ
Funciton: Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)
VAS14_07634
xerD
Site-specific recombinase XerD
VAS14_07629
dsbC
Thiol:disulfide interchange protein
VAS14_07624
recJ
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)
Position: -10
Score: 5.9
Sequence: AACTGTATAAATGTACAGTT
Locus tag: VAS14_12359
Name: umuD
Funciton: DNA polymerase V, subunit UmuD
Locus tag: VAS14_12354
Name: umuC
Funciton: DNA polymerase V, subunit UmuC
VAS14_12359
umuD
DNA polymerase V, subunit UmuD
VAS14_12354
umuC
DNA polymerase V, subunit UmuC
Position: -30
Score: 5.7
Sequence: AGCTGTATGTATAAACAGTA
Locus tag: VAS14_16776
Name: dinB
Funciton: DNA polymerase IV (EC 2.7.7.7)
VAS14_16776
dinB
DNA polymerase IV (EC 2.7.7.7)
Position: -78
Score: 5.7
Sequence: CACTGTATGAATAGACAGTA
Locus tag: VAS14_20496
Name: recA
Funciton: Recombinase A
VAS14_20496
recA
Recombinase A
Position: -45
Score: 5.1
Sequence: CACTGGATATACTCACAGTG
Position: -25
Score: 5.6
Sequence: AACTGTATAAAAAGACAGGT
Locus tag: VAS14_21837
Name: lexA
Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88)
VAS14_21837
lexA
SOS-response repressor and protease LexA (EC 3.4.21.88)
Position: -66
Score: 5.4
Sequence: AACTGGATGTCTATCCAGTT
Locus tag: VAS14_18066
Name: ruvA
Funciton: Holliday junction DNA helicase RuvA
Locus tag: VAS14_18071
Name: ruvB
Funciton: Holliday junction DNA helicase RuvB
VAS14_18066
ruvA
Holliday junction DNA helicase RuvA
VAS14_18071
ruvB
Holliday junction DNA helicase RuvB
Position: -87
Score: 5
Sequence: TACTGTGTTTTTACTCAGTA
Locus tag: VAS14_19446
Name: uvrA
Funciton: Excinuclease ABC subunit A
VAS14_19446
uvrA
Excinuclease ABC subunit A
Position: -27
Score: 5.4
Sequence: CATTGTATAAATAACCAGTA
Locus tag: VAS14_22899
Name: uvrD
Funciton: ATP-dependent DNA helicase II
VAS14_22899
uvrD
ATP-dependent DNA helicase II
Position: -44
Score: 6
Sequence: TACTGTATAAACAGCCAGTA
Locus tag: VAS14_20761
Name: yebG
Funciton: SOS regulon DNA damage-inducible protein
VAS14_20761
yebG
SOS regulon DNA damage-inducible protein
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