Profile of regulator LexA in Vibrionales
Properties
| Regulator family: |
LexA |
| Regulation mode: |
repressor |
| Biological process: |
SOS response |
| Effector: |
DNA damage |
| Regulog: |
LexA - Vibrionales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Vibrio cholerae O1 biovar eltor str. N16961
|
|
VC0852 |
recN |
-26 |
4.7 |
TATTGGTTAATCATACAGGT |
|
VC0668 |
mutH |
-174 |
4.1 |
TACTGTTTATTGATCCATAC |
|
VCA0291 |
intIA |
-40 |
5.9 |
TACTGTACAAATAACCAGTT |
|
VC1368 |
VC1368 |
-60 |
5.8 |
AACTGTATTAAAAAACAGTA |
|
VC1191 |
VC1191 |
-39 |
5.8 |
TACTGTATTTACATACAGCA |
|
VC2711 |
recG |
-65 |
5 |
TCCTGTACAAAAACACAGCT |
|
VC1368 |
VC1368 |
-10 |
4.7 |
TGCTGTAATTATGTACAGTG |
|
VC2287 |
dinB |
-30 |
5.8 |
TACTGTTTATGTATACAGTA |
|
VC0082 |
rmuC |
-56 |
5.5 |
AACTGGACATTTATCCAGTG |
|
VC1846 |
ruvA |
-71 |
5.2 |
TACTGGCTATCCATCCAGTT |
|
VC0394 |
uvrA |
-85 |
5.7 |
AACTGTTTTTTTATCCAGTA |
|
VC0190 |
uvrD |
-28 |
5.1 |
TTATGTATAAATAACCAGTG |
|
VC2326 |
yebG |
-49 |
5.9 |
AACTGTATAAACAGCCAGTT |
|
VC0092 |
lexA |
-25 |
5.6 |
AACTGTATAAAAAGACAGGT |
|
VC0092 |
lexA |
-45 |
5 |
CACTGGATATACTCACAGTC |
|
VC0543 |
recA |
69 |
5.4 |
CACTGTACAAATCAACAGTA |
|
VC2043 |
topB |
-84 |
5.5 |
TACTGGTTAAATTTACAGTT |
|
VC0852 |
recN |
-66 |
6 |
TACTGTATAAAGAAACAGTA |
|
VC0852 |
recN |
-44 |
6 |
AACTGTTTAAACATACAGTA |
|
VC1463 |
rstA |
-89 |
4 |
GGCTGTTTTTTTGTACATTA |
|
VC1454 |
null |
-89 |
4 |
GGCTGTTTTTTTGTACATTA |
|
Vibrio vulnificus CMCP6
|
|
VV1_3092 |
uvrB |
-48 |
5.3 |
GAGTGTATATTTATACAGTT |
|
VV1_0521 |
mutH |
-163 |
4.6 |
TACTGTTTATTGATCCATGA |
|
VV1_2401 |
intIA |
-75 |
4.3 |
GGCTGTATATATACACATAT |
|
VV1_2987 |
imuA |
-28 |
5.8 |
TACTGTATGTATATACAGGT |
|
VV1_2297 |
VC1368 |
-39 |
5.4 |
TACTGAGTATACATACAGTT |
|
VV1_2297 |
VC1368 |
-88 |
5.5 |
GACTGTATAAATGAACAGTA |
|
VV1_2796 |
VC1191 |
-39 |
5.6 |
TACTGTATACACATACAGCA |
|
VV1_0854 |
recG |
-65 |
4.7 |
TCCTGTACAAAAACACAGCC |
|
VV1_0390 |
umuD |
-29 |
5.9 |
AACTGTATATATGTACAGTT |
|
VV1_1830 |
dinB |
-37 |
5.1 |
TACTGTGTTTTTGTCCAGTT |
|
VV1_1591 |
recA |
-104 |
5.4 |
CACTGTACAAATCAACAGTA |
|
VV1_0910 |
rmuC |
-67 |
5.7 |
AACTGGACATTTATCCAGTA |
|
VV1_1166 |
lexA |
-45 |
5.4 |
TACTGGATATACTCACAGTT |
|
VV1_2159 |
ruvA |
-63 |
5.4 |
AACTGGATGTCTATCCAGTT |
|
VV1_1427 |
uvrA |
-88 |
5.7 |
AACTGTTTTTTTATCCAGTA |
|
VV1_0949 |
uvrD |
-30 |
5.8 |
TTCTGTATAAATAACCAGTA |
|
VV1_1166 |
lexA |
-25 |
5.6 |
AACTGTATAAAAAGACAGGT |
|
VV1_1791 |
yebG |
-54 |
5.6 |
AGCTGTATAAACACACAGTA |
|
VV1_3130 |
topB |
-87 |
5.8 |
AACTGTCTATACATACAGTT |
|
VV1_0367 |
recN |
-46 |
5.7 |
TACTGAATTTATATACAGTA |
|
VV1_0367 |
recN |
-68 |
6 |
TACTGTATAAAGAAACAGTA |
|
Vibrio harveyi ATCC BAA-1116
|
|
VIBHAR_00966 |
mutH |
-162 |
4.6 |
CCCTGTTTATTCATCCAGCC |
|
VIBHAR_00956 |
xerD |
-32 |
5.3 |
TACTGTAAATATAAACAGAT |
|
VIBHAR_02961 |
uvrB |
-46 |
4.8 |
AGGTGTATATATATACAGCC |
|
VIBHAR_02003 |
intIA |
-30 |
5.7 |
AACTGTATAAACAACCAGTC |
|
VIBHAR_02866 |
imuA |
-29 |
5.6 |
TACTGTAAATATATACAGGT |
|
VIBHAR_02055 |
VC1191 |
-105 |
5.6 |
TACTGTATACACATACAGCA |
|
VIBHAR_00625 |
recG |
-65 |
5 |
TCCTGTACAAAAACACAGCT |
|
VIBHAR_p08270 |
umuD |
-26 |
6.3 |
TACTGTATATATAAACAGTA |
|
VIBHAR_02527 |
VC1368 |
-39 |
6 |
TACTGTATATGTATACAGTA |
|
VIBHAR_02827 |
recX |
-83 |
5 |
AGCTGTGTAAATAATCAGTA |
|
VIBHAR_06801 |
recX |
-83 |
5 |
AGCTGTGTAAATAATCAGTA |
|
VIBHAR_03513 |
recA |
-89 |
5.4 |
CACTGTATGAATCAACAGTA |
|
VIBHAR_00561 |
rmuC |
-67 |
5.5 |
AACTGGACATTTATCCAGTG |
|
VIBHAR_01600 |
ruvA |
-6 |
5.1 |
GACTGGATGTCTATCCAGTT |
|
VIBHAR_03708 |
uvrA |
-86 |
5.3 |
TACTGTTTTTTTGTCCAGTA |
|
VIBHAR_00351 |
uvrD |
-29 |
5.4 |
TTATGTATAAATAACCAGTA |
|
VIBHAR_03306 |
yebG |
-53 |
5.8 |
AACTGTATAAAAAGCCAGTA |
|
VIBHAR_00268 |
lexA |
-25 |
5.6 |
AACTGTATAAAAAGACAGGT |
|
VIBHAR_00268 |
lexA |
-45 |
5.4 |
TACTGGATATACTCACAGTT |
|
VIBHAR_03041 |
topB |
-84 |
5.1 |
TACTGTTTACCTGTACAGTT |
|
VIBHAR_01130 |
recN |
-46 |
5.5 |
TACTGTTTTCTTATACAGTA |
|
VIBHAR_01130 |
recN |
-68 |
6 |
TACTGTATAAAGAAACAGTA |
|
Vibrio parahaemolyticus RIMD 2210633
|
|
VP0518 |
mutH |
-162 |
4.6 |
CCCTGTTTATTCATCCAGCC |
|
VP2100 |
uvrB |
-74 |
5 |
AGGTGTATATATATACAGCG |
|
VP1865 |
intIA |
-30 |
5.1 |
ACCTGTATAAATAAACAGAC |
|
VP2034 |
imuA |
-29 |
5.9 |
TACTGTATTTATATACAGGT |
|
VP1264 |
VC1191 |
-39 |
5.6 |
TACTGTATACACATACAGCA |
|
VP0157 |
recG |
-65 |
5 |
TCCTGTACAAAAACACAGCT |
|
VP1428 |
VC1368 |
-39 |
6 |
TACTGTTTTTATATACAGTA |
|
VP2342 |
dinB |
-31 |
5.6 |
TACTGTATTTTTAACCAGTG |
|
VP2550 |
recA |
-110 |
5.4 |
CACTGTATGAATCAACAGTA |
|
VP0094 |
rmuC |
-67 |
5.5 |
AACTGGACATTTATCCAGTG |
|
VP1051 |
ruvA |
-63 |
5.1 |
GACTGGATGTCTATCCAGTT |
|
VP2712 |
uvrA |
-85 |
5.3 |
TACTGTTTTTTTGTCCAGTA |
|
VP3013 |
uvrD |
-27 |
5.4 |
TTATGTATAAATAACCAGTA |
|
VP2379 |
yebG |
-47 |
5.8 |
AACTGTATAAAAAGCCAGTA |
|
VP2946 |
VP2946 |
-41 |
5.2 |
ACCTGTCTTTTTATACAGTT |
|
VP2946 |
VP2946 |
-21 |
5.2 |
AACTGTGAGTATATCCAGTA |
|
VP2945 |
lexA |
-25 |
5.6 |
AACTGTATAAAAAGACAGGT |
|
VP2945 |
lexA |
-45 |
5.4 |
TACTGGATATACTCACAGTT |
|
VP2149 |
topB |
-85 |
5.7 |
TACTGTTCATTTATACAGTT |
|
VP0648 |
recN |
-46 |
5.4 |
TACTGTTCTCATATACAGTA |
|
VP0648 |
recN |
-68 |
6 |
TACTGTATAAAGAAACAGTA |
|
Vibrio shilonii AK1
|
|
VSAK1_11158 |
mutH |
-177 |
4.9 |
CACTGATTATTCATACAGCA |
|
VSAK1_06160 |
VC1191 |
-204 |
5.1 |
TACAGTATTCTTATACAGTA |
|
VSAK1_11208 |
xerD |
-21 |
5.2 |
TACTGTATAAACATCCAAGA |
|
VSAK1_25360 |
intIA |
-32 |
5.4 |
AACTGTACACAAACACAGTA |
|
VSAK1_06160 |
VC1191 |
-39 |
5.6 |
TACTGTATACACATACAGCA |
|
VSAK1_26830 |
imuA |
-27 |
5.9 |
TACTGTACATATATACAGGT |
|
VSAK1_25105 |
VC1368 |
-37 |
5.3 |
TACTGGTTGTACATACAGCA |
|
VSAK1_25105 |
VC1368 |
-65 |
5.6 |
TACTGGATATTCATACAGCA |
|
VSAK1_09763 |
recG |
-64 |
5.7 |
AACTGTACAAAAAGACAGTA |
|
VSAK1_12155 |
dinB |
-24 |
6.2 |
AACTGTATAAATAAACAGTT |
|
VSAK1_13165 |
rmuC |
-170 |
5.3 |
ATCTGGACATTTATCCAGTA |
|
VSAK1_02059 |
recA |
-131 |
5.4 |
CACTGTATGAATCAACAGTA |
|
VSAK1_12472 |
lexA |
-25 |
5.7 |
AACTGTATAAACAGACAGGT |
|
VSAK1_12472 |
lexA |
-45 |
5.4 |
TACTGGATATACTCACAGTT |
|
VSAK1_00385 |
ruvA |
-66 |
5.4 |
AACTGGATACCTATCCAGTT |
|
VSAK1_08166 |
uvrA |
-84 |
5.3 |
ACCTGTTTTTTTATCCAGTA |
|
VSAK1_24239 |
uvrD |
-30 |
5.3 |
ATATGTATAAATAACCAGTA |
|
VSAK1_08581 |
yebG |
-57 |
5.6 |
ATCTGTATAAACAGACAGTA |
|
VSAK1_03504 |
topB |
-90 |
5.5 |
AACTGGCTATTTATACAGTT |
|
VSAK1_11915 |
recN |
-28 |
4.9 |
TAATGTTCATTTAAACAGGT |
|
VSAK1_11915 |
recN |
-68 |
6 |
TACTGTATAAAGAAACAGTA |
|
VSAK1_11915 |
recN |
-46 |
5.6 |
TACTGAATTTACATACAGTA |
|
Vibrio splendidus LGP32
|
|
VS_0522 |
mutH |
-115 |
4.9 |
CCCTGTTTATTTATCCACTA |
|
VS_0980 |
uvrB |
-35 |
5 |
ACCTGATTAAAAAAACAGTA |
|
VS_1890 |
intIA |
-29 |
5.2 |
TCATGTACATATAACCAGTT |
|
VS_1042 |
imuA |
-28 |
6.1 |
TACTGTATAAATATACAGGT |
|
VS_0158 |
recG |
-52 |
5.2 |
GCCTGTACAAAAATCCAGTA |
|
VS_0702 |
dinB |
-41 |
5.9 |
TACTGTTTATAAATACAGTT |
|
VS_0097 |
rmuC |
-68 |
5.7 |
AACTGGACATTTATCCAGTA |
|
VS_2596 |
recA |
-94 |
5.4 |
CACTGTATGAATCAACAGTA |
|
VS_1107 |
ruvA |
-67 |
5.6 |
AACTGGATAAGTATCCAGTT |
|
VS_0320 |
uvrA |
-84 |
5.7 |
TACTGTTTTTTTATCCAGTA |
|
VS_3084 |
uvrD |
-33 |
5.2 |
TTATGTATAAATACCCAGTA |
|
VS_0670 |
yebG |
-48 |
5.6 |
AACTGTATAAAAAGCCAGTG |
|
VS_1206 |
VC1191 |
78 |
5.6 |
TACTGTATACACATACAGCA |
|
VS_3006 |
lexA |
-25 |
5.6 |
AACTGTATAAAAAGACAGGT |
|
VS_3006 |
lexA |
-45 |
5.2 |
TACTGGATATACTCACAGTC |
|
VS_0940 |
topB |
-85 |
6 |
AACTGTATAAACAACCAGTT |
|
VS_0646 |
recN |
-46 |
5.2 |
TACTGGGCTTATATACAGTG |
|
VS_0646 |
recN |
-68 |
6 |
TACTGTATAAAGAAACAGTA |
|
Vibrio fischeri ES114
|
|
VF_0455 |
mutH |
-140 |
4.9 |
CACTGTATATGGATCCAGAA |
|
VF_1493 |
VC1191 |
-43 |
5.4 |
TACTGTATAAATACACACTG |
|
VF_0448 |
xerD |
-51 |
5 |
TACTGTAATTCTAACCAGTG |
|
VF_1269 |
umuD |
-27 |
5.2 |
CGCTGTACTTATATACAGTG |
|
VF_0734 |
dinB |
-27 |
5.6 |
AACTGTGTTTTTATACAGTT |
|
VF_0044 |
rmuC |
-62 |
5.7 |
AACTGGACATTTATCCAGTA |
|
VF_2442 |
lexA |
-25 |
5.7 |
AACTGTATAAACAGACAGGT |
|
VF_2442 |
lexA |
-45 |
5.1 |
AGCTGTATATACTCACAGTG |
|
VF_0951 |
ruvA |
-66 |
5.8 |
TACTGGATATCTATCCAGTT |
|
VF_0341 |
uvrA |
-90 |
5.5 |
CACTGTTTTTTTATCCAGTA |
|
VF_0068 |
uvrD |
-27 |
5.2 |
ACATGTATAAATAACCAGTG |
|
VF_0577 |
yebG |
-41 |
5.5 |
TACTGTATAAAACACCAGTT |
|
VF_1641 |
topB |
-29 |
5.3 |
AACTGTCTATTCATACAGGT |
|
VF_0535 |
recA |
-69 |
5.7 |
CACTGTACAAATAGACAGTA |
|
VF_1998 |
recN |
-54 |
5.3 |
TACTGTGTCTATATACAGTG |
|
VF_1998 |
recN |
-76 |
6 |
TACTGTATAAAGAAACAGTA |
|
Vibrio salmonicida LFI1238
|
|
VSAL_I0568 |
mutH |
-137 |
5.4 |
CACTGTATATAGATCCAGAA |
|
VSAL_I1693 |
VC1191 |
-21 |
5.4 |
TACTGTATAAATACACACTG |
|
VSAL_I0562 |
xerD |
-45 |
5.2 |
TACTGTAATTCTAACCAGTA |
|
VSAL_I0965 |
dinB |
-132 |
5.8 |
GACTGTATATTTAAACAGTT |
|
VSAL_I0957 |
dinB |
-68 |
5.8 |
AACTGTGTATTTATACAGTT |
|
VSAL_I2995 |
rmuC |
-62 |
5.7 |
AACTGGACATTTATCCAGTA |
|
VSAL_I0634 |
recA |
-69 |
5.7 |
CACTGTATGAATAGACAGTA |
|
VSAL_I2893 |
lexA |
-25 |
5.5 |
CACTGTATAAACAGACAGGT |
|
VSAL_I2893 |
lexA |
-45 |
5.3 |
AGCTGTATATACTCACAGTT |
|
VSAL_I1888 |
ruvA |
-66 |
5.8 |
TACTGGATATCTATCCAGTT |
|
VSAL_I0447 |
uvrA |
-88 |
5.7 |
TACTGTTTTTTTATCCAGTA |
|
VSAL_I0222 |
uvrD |
-27 |
5.2 |
ACATGTATAAATAACCAGTG |
|
VSAL_I0676 |
yebG |
-41 |
5.5 |
TACTGTATAAAACACCAGTT |
|
VSAL_I2155 |
topB |
-57 |
4.9 |
AACTGTCTATTCGTACAGGT |
|
VSAL_I2475 |
recN |
-47 |
6 |
TACTGTATAAAGAAACAGTA |
|
VSAL_I2475 |
recN |
-25 |
5.5 |
TACTGTTTCTTTATACAGTA |
|
Vibrio angustum S14
|
|
VAS14_07584 |
mutH |
-165 |
5 |
GCCTGTCTATTTAAACAGTT |
|
VAS14_07634 |
xerD |
-55 |
4.5 |
TACTGTGTTTTTATCCATGT |
|
VAS14_12359 |
umuD |
-10 |
5.9 |
AACTGTATAAATGTACAGTT |
|
VAS14_16776 |
dinB |
-30 |
5.7 |
AGCTGTATGTATAAACAGTA |
|
VAS14_20496 |
recA |
-78 |
5.7 |
CACTGTATGAATAGACAGTA |
|
VAS14_22754 |
rmuC |
-73 |
5.3 |
AGCTGGACATTTATCCAGTA |
|
VAS14_21837 |
lexA |
-25 |
5.6 |
AACTGTATAAAAAGACAGGT |
|
VAS14_21837 |
lexA |
-45 |
5.1 |
CACTGGATATACTCACAGTG |
|
VAS14_18066 |
ruvA |
-66 |
5.4 |
AACTGGATGTCTATCCAGTT |
|
VAS14_19446 |
uvrA |
-87 |
5 |
TACTGTGTTTTTACTCAGTA |
|
VAS14_22899 |
uvrD |
-27 |
5.4 |
CATTGTATAAATAACCAGTA |
|
VAS14_20761 |
yebG |
-44 |
6 |
TACTGTATAAACAGCCAGTA |
|
VAS14_05738 |
topB |
-86 |
5.6 |
AACTGGTTTTATATCCAGTA |
|
VAS14_07144 |
recN |
-42 |
5.5 |
TACTGTATGTAAAAACAGGT |
|
VAS14_07144 |
recN |
-64 |
5.2 |
TACTGGTTATGGATACAGTA |
|
Photobacterium profundum SS9
|
|
PBPRA0694 |
recN |
-64 |
5.6 |
TACTGTACGTAGATACAGTA |
|
PBPRA0566 |
xerD |
-78 |
4.4 |
TACTGTGTTTATATCCATGC |
|
PBPRB0973 |
umuD |
-4 |
5.4 |
AACTGTGCATACATACAGTG |
|
PBPRA0832 |
dinB |
-64 |
6.1 |
TACTGTATATAAAAACAGTT |
|
PBPRA0165 |
lexA |
-65 |
5.3 |
GACTGTATAAACAAACAGGG |
|
PBPRA0165 |
lexA |
-85 |
5.3 |
CACTGGATATACTCACAGTA |
|
PBPRA3068 |
recA |
-64 |
5.7 |
CACTGTATGAATAGACAGTA |
|
PBPRA1116 |
ruvA |
-65 |
5 |
TGCTGGATATCCATCCAGCA |
|
PBPRA3290 |
uvrA |
-91 |
5.4 |
TACTGTATCTTTATACAGCA |
|
PBPRA3513 |
uvrD |
-27 |
5.4 |
CATTGTATAAATAACCAGTA |
|
PBPRA3003 |
yebG |
-38 |
5.5 |
TACTGTATAAGCAGCCAGTA |
|
PBPRA2590 |
topB |
-88 |
5.2 |
AACTGTTGTTATATCCAGTA |
|
PBPRA0115 |
rmuC |
-68 |
5.4 |
TGCTGGACATTTATCCAGTA |
|
PBPRA0694 |
recN |
-42 |
5.4 |
TACTGTATGAAAACACAGGT |
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Regulatory Sites
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