Regulon of RbsR in Vibrio harveyi ATCC BAA-1116

Properties
Regulator type:	Transcription factor
TF locus tag:	VIBHAR_06141
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Ribose utilization
Effector:	Ribose
Regulog:	RbsR - Vibrionales
Statistics of regulated genes:
- Genes	6
- Operons	1
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 15 sites [see more]

Member of regulog collections

By trascription factor - RbsR
By taxonomy - Vibrionales
By TF family - LacI
By effector - Ribose
By pathway - Ribose utilization

Regulated operons
	Locus Tag	Name	Function
Position: -222 Score: 6.2 Sequence: CTATCGAAACGTTTCGATTT Position: -95 Score: 7 Sequence: TCATCGAAACGTTTCGATGT Locus tag: VIBHAR_06146 Name: rbsD Funciton: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1) Locus tag: VIBHAR_06145 Name: rbsA Funciton: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) Locus tag: VIBHAR_06144 Name: rbsC Funciton: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) Locus tag: VIBHAR_06143 Name: rbsB Funciton: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) Locus tag: VIBHAR_06142 Name: rbsK Funciton: Ribokinase (EC 2.7.1.15) Locus tag: VIBHAR_06141 Name: rbsR Funciton: Transcriptional repressor of ribose utilization, LacI family
	VIBHAR_06146	rbsD	D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)
	VIBHAR_06145	rbsA	Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
	VIBHAR_06144	rbsC	Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
	VIBHAR_06143	rbsB	Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
	VIBHAR_06142	rbsK	Ribokinase (EC 2.7.1.15)
	VIBHAR_06141	rbsR	Transcriptional repressor of ribose utilization, LacI family

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD