Regulon of RbsR in Vibrio harveyi ATCC BAA-1116
| Regulator type: | Transcription factor |
| TF locus tag: | VIBHAR_06141 |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Ribose utilization |
| Effector: | Ribose |
| Regulog: | RbsR - Vibrionales |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 1 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - RbsR
- By taxonomy - Vibrionales
- By TF family - LacI
- By effector - Ribose
- By pathway - Ribose utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -222
Score: 6.2 Sequence: CTATCGAAACGTTTCGATTT
Position: -95
Score: 7 Sequence: TCATCGAAACGTTTCGATGT
Locus tag: VIBHAR_06146
Name: rbsD Funciton: D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)
Locus tag: VIBHAR_06145
Name: rbsA Funciton: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
Locus tag: VIBHAR_06144
Name: rbsC Funciton: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
Locus tag: VIBHAR_06143
Name: rbsB Funciton: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
Locus tag: VIBHAR_06142
Name: rbsK Funciton: Ribokinase (EC 2.7.1.15)
Locus tag: VIBHAR_06141
Name: rbsR Funciton: Transcriptional repressor of ribose utilization, LacI family |
|||
|
rbsD
|
D-ribose pyranase (D-ribose mutarotase) (EC 5.5.1.n1)
|
||
|
rbsA
|
Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
|
||
|
rbsC
|
Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
|
||
|
rbsB
|
Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
|
||
|
rbsK
|
Ribokinase (EC 2.7.1.15)
|
||
|
rbsR
|
Transcriptional repressor of ribose utilization, LacI family
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |