Regulon of UxuR in Haemophilus somnus 2336
| Regulator type: | Transcription factor |
| TF locus tag: | HSM_1913, HSM_0414 |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Glucuronate utilization |
| Effector: | Glucuronate |
| Regulog: | UxuR - Pasteurellales |
| Statistics of regulated genes: | |
| - Genes | 13 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - ExuR/UxuR
- By taxonomy - Pasteurellales
- By TF family - GntR/Others
- By effector - Glucuronate
- By pathway - Glucuronate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -196
Score: 5.2 Sequence: AAACTGGTAAACCAGTTA
Position: -68
Score: 4.5 Sequence: AATTTGGTGAACCAGAAA
Locus tag: HSM_0414
Name: uxuR Funciton: Hexuronate utilization operon transcriptional repressor UxuR
Locus tag: HSM_0415
Name: uxuA Funciton: Mannonate dehydratase (EC 4.2.1.8) |
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uxuR
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Hexuronate utilization operon transcriptional repressor UxuR
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uxuA
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Mannonate dehydratase (EC 4.2.1.8)
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Position: -78
Score: 5.1 Sequence: TTTTTGGTATTCCAATTT
Locus tag: HSM_1913
Name: uxuR Funciton: Hexuronate utilization operon transcriptional repressor UxuR |
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uxuR
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Hexuronate utilization operon transcriptional repressor UxuR
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Position: -119
Score: 5.6 Sequence: AAATTGGTTTACCAAAAA
Locus tag: HSM_0411
Name: uidA Funciton: beta-D-glucuronidase
Locus tag: HSM_0410
Name: uidB Funciton: glucuronides GPH transporter
Locus tag: HSM_0409
Name: uxaC Funciton: Uronate isomerase (EC 5.3.1.12)
Locus tag: HSM_0408
Name: eda Funciton: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) |
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uidA
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beta-D-glucuronidase
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uidB
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glucuronides GPH transporter
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uxaC
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Uronate isomerase (EC 5.3.1.12)
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eda
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2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
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Position: -101
Score: 5.1 Sequence: AAATTGGAATACCAAAAA
Locus tag: HSM_1914
Name: HI0053 Funciton: Oxidoreductase, zinc-binding dehydrogenase family (EC 1.1.1.-)
Locus tag: HSM_1915
Name: uxuP Funciton: predicted glucuronate TRAP transporter, periplasmic subunit
Locus tag: HSM_1916
Name: uxuQ Funciton: predicted hexuronate TRAP transporter, small subunit
Locus tag: HSM_1917
Name: uxuM Funciton: predicted hexuronate TRAP transporter, large subunit |
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HI0053
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Oxidoreductase, zinc-binding dehydrogenase family (EC 1.1.1.-)
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uxuP
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predicted glucuronate TRAP transporter, periplasmic subunit
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uxuQ
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predicted hexuronate TRAP transporter, small subunit
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uxuM
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predicted hexuronate TRAP transporter, large subunit
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Position: -199
Score: 4.8 Sequence: TTTCTGGTTCACCAAATT
Position: -71
Score: 5.3 Sequence: TAACTGGTTTACCAGTTT
Locus tag: HSM_0413
Name: uxuB Funciton: D-mannonate oxidoreductase (EC 1.1.1.57)
Locus tag: HSM_0412
Name: null Funciton: hypothetical protein |
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uxuB
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D-mannonate oxidoreductase (EC 1.1.1.57)
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hypothetical protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |