Regulon of UxuR in Haemophilus somnus 2336

Properties
Regulator type:	Transcription factor
TF locus tag:	HSM_1913, HSM_0414
Regulator family:	GntR/Others
Regulation mode:	repressor
Biological process:	Glucuronate utilization
Effector:	Glucuronate
Regulog:	UxuR - Pasteurellales
Statistics of regulated genes:
- Genes	13
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 19 sites [see more]

Member of regulog collections

By trascription factor - ExuR/UxuR
By taxonomy - Pasteurellales
By TF family - GntR/Others
By effector - Glucuronate
By pathway - Glucuronate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -196 Score: 5.2 Sequence: AAACTGGTAAACCAGTTA Position: -68 Score: 4.5 Sequence: AATTTGGTGAACCAGAAA Locus tag: HSM_0414 Name: uxuR Funciton: Hexuronate utilization operon transcriptional repressor UxuR Locus tag: HSM_0415 Name: uxuA Funciton: Mannonate dehydratase (EC 4.2.1.8)
	HSM_0414	uxuR	Hexuronate utilization operon transcriptional repressor UxuR
	HSM_0415	uxuA	Mannonate dehydratase (EC 4.2.1.8)
Position: -78 Score: 5.1 Sequence: TTTTTGGTATTCCAATTT Locus tag: HSM_1913 Name: uxuR Funciton: Hexuronate utilization operon transcriptional repressor UxuR
	HSM_1913	uxuR	Hexuronate utilization operon transcriptional repressor UxuR
Position: -119 Score: 5.6 Sequence: AAATTGGTTTACCAAAAA Locus tag: HSM_0411 Name: uidA Funciton: beta-D-glucuronidase Locus tag: HSM_0410 Name: uidB Funciton: glucuronides GPH transporter Locus tag: HSM_0409 Name: uxaC Funciton: Uronate isomerase (EC 5.3.1.12) Locus tag: HSM_0408 Name: eda Funciton: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
	HSM_0411	uidA	beta-D-glucuronidase
	HSM_0410	uidB	glucuronides GPH transporter
	HSM_0409	uxaC	Uronate isomerase (EC 5.3.1.12)
	HSM_0408	eda	2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
Position: -101 Score: 5.1 Sequence: AAATTGGAATACCAAAAA Locus tag: HSM_1914 Name: HI0053 Funciton: Oxidoreductase, zinc-binding dehydrogenase family (EC 1.1.1.-) Locus tag: HSM_1915 Name: uxuP Funciton: predicted glucuronate TRAP transporter, periplasmic subunit Locus tag: HSM_1916 Name: uxuQ Funciton: predicted hexuronate TRAP transporter, small subunit Locus tag: HSM_1917 Name: uxuM Funciton: predicted hexuronate TRAP transporter, large subunit
	HSM_1914	HI0053	Oxidoreductase, zinc-binding dehydrogenase family (EC 1.1.1.-)
	HSM_1915	uxuP	predicted glucuronate TRAP transporter, periplasmic subunit
	HSM_1916	uxuQ	predicted hexuronate TRAP transporter, small subunit
	HSM_1917	uxuM	predicted hexuronate TRAP transporter, large subunit
Position: -199 Score: 4.8 Sequence: TTTCTGGTTCACCAAATT Position: -71 Score: 5.3 Sequence: TAACTGGTTTACCAGTTT Locus tag: HSM_0413 Name: uxuB Funciton: D-mannonate oxidoreductase (EC 1.1.1.57) Locus tag: HSM_0412 Name: null Funciton: hypothetical protein
	HSM_0413	uxuB	D-mannonate oxidoreductase (EC 1.1.1.57)
	HSM_0412		hypothetical protein

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD