Regulon of UxuR in Photobacterium profundum SS9

Properties
Regulator type:	Transcription factor
TF locus tag:	PBPRB1510, PBPRB1875
Regulator family:	GntR/Others
Regulation mode:	repressor
Biological process:	Glucuronate utilization
Effector:	Glucuronate
Regulog:	UxuR - Vibrionales
Statistics of regulated genes:
- Genes	9
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 28 sites [see more]

Member of regulog collections

By trascription factor - ExuR/UxuR
By taxonomy - Vibrionales
By TF family - GntR/Others
By effector - Glucuronate
By pathway - Glucuronate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -61 Score: 4.4 Sequence: CCATAGGTTCACCAATCT Locus tag: PBPRB1515 Name: uxaC Funciton: Uronate isomerase (EC 5.3.1.12) Locus tag: PBPRB1516 Name: uxaB Funciton: Altronate oxidoreductase (EC 1.1.1.58) Locus tag: PBPRB1517 Name: uxaA Funciton: Altronate hydrolase (EC 4.2.1.7)
	PBPRB1515	uxaC	Uronate isomerase (EC 5.3.1.12)
	PBPRB1516	uxaB	Altronate oxidoreductase (EC 1.1.1.58)
	PBPRB1517	uxaA	Altronate hydrolase (EC 4.2.1.7)
Position: -201 Score: 5.1 Sequence: CAATTGGTTGACCTATAT Position: -167 Score: 5.6 Sequence: ATATTGGTCAACCAATTC Position: -54 Score: 5.2 Sequence: ACATTGGTTAACCAAACG Locus tag: PBPRB1878 Name: uxuQ Funciton: predicted TRAP-type glucuronate transporter, small membrane subunit Locus tag: PBPRB1879 Name: uxuM Funciton: predicted TRAP-type glucuronate transporter, large membrane subunit Locus tag: PBPRB1880 Name: uxuB Funciton: D-mannonate oxidoreductase (EC 1.1.1.57)
	PBPRB1878	uxuQ	predicted TRAP-type glucuronate transporter, small membrane subunit
	PBPRB1879	uxuM	predicted TRAP-type glucuronate transporter, large membrane subunit
	PBPRB1880	uxuB	D-mannonate oxidoreductase (EC 1.1.1.57)
Position: -153 Score: 5.4 Sequence: AAAGAGGTTGACCAATTT Locus tag: PBPRB1875 Name: uxuR Funciton: Uxu operon transcriptional regulator, GntR family Locus tag: PBPRB1874 Name: uxuA Funciton: Mannonate dehydratase (EC 4.2.1.8)
	PBPRB1875	uxuR	Uxu operon transcriptional regulator, GntR family
	PBPRB1874	uxuA	Mannonate dehydratase (EC 4.2.1.8)
Position: -192 Score: 4.6 Sequence: CGTTTGGTTAACCAATGT Position: -79 Score: 5.7 Sequence: GAATTGGTTGACCAATAT Position: -45 Score: 5.2 Sequence: ATATAGGTCAACCAATTG Locus tag: PBPRB1877 Name: uxuP Funciton: predicted TRAP-type glucuronate transporter, periplasmic subunit
	PBPRB1877	uxuP	predicted TRAP-type glucuronate transporter, periplasmic subunit

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD