Regulon of UxuR in Vibrio parahaemolyticus RIMD 2210633

Properties
Regulator type:	Transcription factor
TF locus tag:	VPA1701
Regulator family:	GntR/Others
Regulation mode:	repressor
Biological process:	Glucuronate utilization
Effector:	Glucuronate
Regulog:	UxuR - Vibrionales
Statistics of regulated genes:
- Genes	10
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 28 sites [see more]

Member of regulog collections

By trascription factor - ExuR/UxuR
By taxonomy - Vibrionales
By TF family - GntR/Others
By effector - Glucuronate
By pathway - Glucuronate utilization

Regulated operons
	Locus Tag	Name	Function
Position: -50 Score: 5 Sequence: ATAGAGGTTGACCAATTG Locus tag: VPA1701 Name: uxuR Funciton: Uxu operon transcriptional regulator, GntR family
	VPA1701	uxuR	Uxu operon transcriptional regulator, GntR family
Position: -197 Score: 5.3 Sequence: AAATTGATTGACCAAAAT Position: -163 Score: 6 Sequence: AAATTGGTTAACCAATTC Position: -48 Score: 5.6 Sequence: ACATTGGTAAACCAATTG Locus tag: VPA1703 Name: uxuQ Funciton: predicted TRAP-type glucuronate transporter, small membrane subunit Locus tag: VPA1704 Name: uxuM Funciton: predicted TRAP-type glucuronate transporter, large membrane subunit Locus tag: VPA1705 Name: uxuB Funciton: D-mannonate oxidoreductase (EC 1.1.1.57) Locus tag: VPA1706 Name: uxaC Funciton: Uronate isomerase (EC 5.3.1.12) Locus tag: VPA1707 Name: kdgK Funciton: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) Locus tag: VPA1708 Name: eda Funciton: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) Locus tag: VPA1709 Name: ygjV Funciton: Conserved hypothetical protein
	VPA1703	uxuQ	predicted TRAP-type glucuronate transporter, small membrane subunit
	VPA1704	uxuM	predicted TRAP-type glucuronate transporter, large membrane subunit
	VPA1705	uxuB	D-mannonate oxidoreductase (EC 1.1.1.57)
	VPA1706	uxaC	Uronate isomerase (EC 5.3.1.12)
	VPA1707	kdgK	2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
	VPA1708	eda	2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
	VPA1709	ygjV	Conserved hypothetical protein
Position: -170 Score: 6 Sequence: GAATTGGTTAACCAATTT Position: -136 Score: 5.1 Sequence: ATTTTGGTCAATCAATTT Position: -33 Score: 5.1 Sequence: ATATTGGATAACCAATCC Locus tag: VPA1702 Name: uxuP Funciton: predicted TRAP-type glucuronate transporter, periplasmic subunit
	VPA1702	uxuP	predicted TRAP-type glucuronate transporter, periplasmic subunit
Position: -140 Score: 4.9 Sequence: AAAACGGTTAACCACATT Locus tag: VPA1700 Name: uxuA Funciton: Mannonate dehydratase (EC 4.2.1.8)
	VPA1700	uxuA	Mannonate dehydratase (EC 4.2.1.8)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD