Regulon of UxuR in Vibrio parahaemolyticus RIMD 2210633
| Regulator type: | Transcription factor |
| TF locus tag: | VPA1701 |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Glucuronate utilization |
| Effector: | Glucuronate |
| Regulog: | UxuR - Vibrionales |
| Statistics of regulated genes: | |
| - Genes | 10 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - ExuR/UxuR
- By taxonomy - Vibrionales
- By TF family - GntR/Others
- By effector - Glucuronate
- By pathway - Glucuronate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -50
Score: 5 Sequence: ATAGAGGTTGACCAATTG
Locus tag: VPA1701
Name: uxuR Funciton: Uxu operon transcriptional regulator, GntR family |
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uxuR
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Uxu operon transcriptional regulator, GntR family
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Position: -197
Score: 5.3 Sequence: AAATTGATTGACCAAAAT
Position: -163
Score: 6 Sequence: AAATTGGTTAACCAATTC
Position: -48
Score: 5.6 Sequence: ACATTGGTAAACCAATTG
Locus tag: VPA1703
Name: uxuQ Funciton: predicted TRAP-type glucuronate transporter, small membrane subunit
Locus tag: VPA1704
Name: uxuM Funciton: predicted TRAP-type glucuronate transporter, large membrane subunit
Locus tag: VPA1705
Name: uxuB Funciton: D-mannonate oxidoreductase (EC 1.1.1.57)
Locus tag: VPA1706
Name: uxaC Funciton: Uronate isomerase (EC 5.3.1.12)
Locus tag: VPA1707
Name: kdgK Funciton: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
Locus tag: VPA1708
Name: eda Funciton: 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
Locus tag: VPA1709
Name: ygjV Funciton: Conserved hypothetical protein |
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uxuQ
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predicted TRAP-type glucuronate transporter, small membrane subunit
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uxuM
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predicted TRAP-type glucuronate transporter, large membrane subunit
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uxuB
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D-mannonate oxidoreductase (EC 1.1.1.57)
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uxaC
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Uronate isomerase (EC 5.3.1.12)
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kdgK
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2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
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eda
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2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14)
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ygjV
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Conserved hypothetical protein
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Position: -170
Score: 6 Sequence: GAATTGGTTAACCAATTT
Position: -136
Score: 5.1 Sequence: ATTTTGGTCAATCAATTT
Position: -33
Score: 5.1 Sequence: ATATTGGATAACCAATCC
Locus tag: VPA1702
Name: uxuP Funciton: predicted TRAP-type glucuronate transporter, periplasmic subunit |
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uxuP
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predicted TRAP-type glucuronate transporter, periplasmic subunit
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Position: -140
Score: 4.9 Sequence: AAAACGGTTAACCACATT
Locus tag: VPA1700
Name: uxuA Funciton: Mannonate dehydratase (EC 4.2.1.8) |
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uxuA
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Mannonate dehydratase (EC 4.2.1.8)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |