Regulon of Fur in Rhodospirillum centenum SW

Properties
Regulator type:	Transcription factor
TF locus tag:	RC1_2558
Regulator family:	FUR
Regulation mode:	repressor (activator)
Biological process:	Iron homeostasis
Effector:	Iron ion, (Fe2+)
Regulog:	Fur - Rhodospirillales
Statistics of regulated genes:
- Genes	31
- Operons	10
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 103 sites [see more]

Member of regulog collections

By taxonomy - Rhodospirillales
By trascription factor - FUR
By TF family - FUR
By effector - Iron ion, (Fe2+)
By pathway - Iron homeostasis

Regulated operons
	Locus Tag	Name	Function
Position: -90 Score: 3.6 Sequence: TATGCAATTTAGAAGCGTT Locus tag: RC1_3892 Name: fcuA Funciton: TonB-dependent siderophore receptor Locus tag: RC1_3893 Name: null Funciton: Hypothetical protein Locus tag: RC1_3894 Name: COG3182 Funciton: PepSY-associated TM helix domain protein
	RC1_3892	fcuA	TonB-dependent siderophore receptor
	RC1_3893		Hypothetical protein
	RC1_3894	COG3182	PepSY-associated TM helix domain protein
Position: -164 Score: 5 Sequence: AATGATAACCATTCTCATG Locus tag: RC1_3215 Name: fhuA Funciton: TonB-dependent siderophore receptor Locus tag: RC1_3216 Name: null Funciton: Hypothetical protein Locus tag: RC1_3217 Name: null Funciton: Hypothetical protein Locus tag: RC1_3218 Name: COG3182 Funciton: PepSY-associated TM helix domain protein
	RC1_3215	fhuA	TonB-dependent siderophore receptor
	RC1_3216		Hypothetical protein
	RC1_3217		Hypothetical protein
	RC1_3218	COG3182	PepSY-associated TM helix domain protein
Position: -57 Score: 5.1 Sequence: GCTGCGATTGATTTGCATT Locus tag: RC1_3427 Name: bfd Funciton: Bacterioferritin-associated ferredoxin
	RC1_3427	bfd	Bacterioferritin-associated ferredoxin
Position: -68 Score: 4.6 Sequence: CTTGATAATGCCTCGCATT Locus tag: RC1_3812 Name: fecI3 Funciton: Sigma factor, ECF subfamily Locus tag: RC1_3811 Name: fecR4 Funciton: Fe2+-dicitrate sensor, membrane component Locus tag: RC1_3810 Name: omp14 Funciton: TonB-dependent siderophore receptor Locus tag: RC1_3809 Name: piuB Funciton: Iron-uptake factor PiuB
	RC1_3812	fecI3	Sigma factor, ECF subfamily
	RC1_3811	fecR4	Fe2+-dicitrate sensor, membrane component
	RC1_3810	omp14	TonB-dependent siderophore receptor
	RC1_3809	piuB	Iron-uptake factor PiuB
Position: -149 Score: 5.5 Sequence: AATGCGAACAACTCGCATT Locus tag: RC1_3856 Name: omp17 Funciton: TonB-dependent siderophore receptor Locus tag: RC1_3857 Name: null Funciton: Hypothetical protein Locus tag: RC1_3858 Name: hmuS Funciton: Hemin transport protein HmuS Locus tag: RC1_3859 Name: hmuT Funciton: Hemin-binding periplasmic protein HmuT precursor, putative Locus tag: RC1_3860 Name: hmuU Funciton: Hemin transport system permease protein HmuU, putative Locus tag: RC1_3861 Name: hmuV Funciton: Hemin transport system ATP-binding protein HmuV, putative
	RC1_3856	omp17	TonB-dependent siderophore receptor
	RC1_3857		Hypothetical protein
	RC1_3858	hmuS	Hemin transport protein HmuS
	RC1_3859	hmuT	Hemin-binding periplasmic protein HmuT precursor, putative
	RC1_3860	hmuU	Hemin transport system permease protein HmuU, putative
	RC1_3861	hmuV	Hemin transport system ATP-binding protein HmuV, putative
Position: -240 Score: 5.4 Sequence: AATAAGAATGACTCGCATT Locus tag: RC1_0333 Name: fepA Funciton: TonB-dependent siderophore receptor Locus tag: RC1_0332 Name: null Funciton: Predicted hydrolase of the alpha/beta superfamily Locus tag: RC1_0331 Name: null Funciton: Iron uptake protein Locus tag: RC1_0330 Name: COG3182 Funciton: PepSY-associated TM helix domain protein Locus tag: RC1_0328 Name: PF11804 Funciton: iron uptake protein
	RC1_0333	fepA	TonB-dependent siderophore receptor
	RC1_0332		Predicted hydrolase of the alpha/beta superfamily
	RC1_0331		Iron uptake protein
	RC1_0330	COG3182	PepSY-associated TM helix domain protein
	RC1_0328	PF11804	iron uptake protein
Position: -68 Score: 5.6 Sequence: ATTGCGAATCGCTCGCATT Locus tag: RC1_3980 Name: omp16 Funciton: TonB-dependent siderophore receptor
	RC1_3980	omp16	TonB-dependent siderophore receptor
Position: -78 Score: 5.3 Sequence: ATTGATATTGACTCGCAAT Locus tag: RC1_0945 Name: omp9 Funciton: TonB-dependent siderophore receptor Locus tag: RC1_0946 Name: COG3182 Funciton: PepSY-associated TM helix domain protein
	RC1_0945	omp9	TonB-dependent siderophore receptor
	RC1_0946	COG3182	PepSY-associated TM helix domain protein
Position: -86 Score: 4.6 Sequence: GGTGCGACTTGTTCGCATT Locus tag: RC1_2449 Name: feoA Funciton: Ferrous iron transport protein A Locus tag: RC1_2448 Name: feoB Funciton: Ferrous iron transport protein B
	RC1_2449	feoA	Ferrous iron transport protein A
	RC1_2448	feoB	Ferrous iron transport protein B
Position: -86 Score: 4.3 Sequence: GTTGATTATCATTCGCACT Locus tag: RC1_3833 Name: exbB Funciton: biopolymer transport ExbB protein Locus tag: RC1_3834 Name: exbD Funciton: biopolymer transport ExbD protein Locus tag: RC1_3835 Name: tonB Funciton: Ferric siderophore transport system, periplasmic binding protein TonB
	RC1_3833	exbB	biopolymer transport ExbB protein
	RC1_3834	exbD	biopolymer transport ExbD protein
	RC1_3835	tonB	Ferric siderophore transport system, periplasmic binding protein TonB

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of Fur in Rhodospirillum centenum SW

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --