Regulon of NtrC in Pelobacter carbinolicus str. DSM 2380

Properties
Regulator type:	Transcription factor
TF locus tag:	Pcar_1994
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Desulfuromonadales
Statistics of regulated genes:
- Genes	5
- Operons	3
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 56 sites [see more]

Member of regulog collections

By taxonomy - Desulfuromonadales
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -241 Score: 4.4 Sequence: TGCTCAAAATTTAAGCC Locus tag: Pcar_1021 Name: glnK2 Funciton: Nitrogen regulatory protein P-II Locus tag: Pcar_1022 Name: amtB2 Funciton: Ammonium transporter
	Pcar_1021	glnK2	Nitrogen regulatory protein P-II
	Pcar_1022	amtB2	Ammonium transporter
Position: -263 Score: 4.7 Sequence: TGCCTCCATTATGGGCA Position: -242 Score: 4.5 Sequence: TGCCTATTTTGGAAGCA Locus tag: Pcar_2589 Name: amtB Funciton: Ammonium transporter
	Pcar_2589	amtB	Ammonium transporter
Position: -306 Score: 4.1 Sequence: TGTTTAAATAATAGTCA Position: -274 Score: 4.9 Sequence: TGTCTAAATATTGGGCA Locus tag: Pcar_1500 Name: glnB Funciton: Nitrogen regulatory protein P-II Locus tag: Pcar_1501 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2)
	Pcar_1500	glnB	Nitrogen regulatory protein P-II
	Pcar_1501	glnA	Glutamine synthetase type I (EC 6.3.1.2)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD