Profile of regulator NtrC in Desulfuromonadales
Properties
| Regulator family: |
Fis |
| Regulation mode: |
activator (repressor) |
| Biological process: |
Nitrogen assimilation |
| Effector: |
Phosphorylated NtrB, signal histidine kinase |
| Regulog: |
NtrC - Desulfuromonadales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Geobacter metallireducens GS-15
|
|
Gmet_2561 |
nifR |
-46 |
5 |
TGCTTAAATTTTAAGCA |
|
Gmet_1186 |
gdhA |
-152 |
4.5 |
TGCCGCAAATTCGGGCA |
|
Gmet_0669 |
nifEN |
-217 |
4.9 |
TGCATAAAATGTGTGCA |
|
Gmet_0693 |
Gmet_0693 |
-349 |
5 |
TGCTTATATAATGTGCA |
|
Gmet_1351 |
glnB |
-259 |
4.3 |
TGCTTCTGATTTGTGCA |
|
Geobacter sulfurreducens PCA
|
|
GSU1005 |
nifR |
-41 |
5.2 |
TGCCTAAATTTTAAGCA |
|
GSU1305 |
gdhA |
-151 |
4.8 |
TGCCGATAAATCAGGCA |
|
GSU1305 |
gdhA |
-110 |
4.5 |
TGCACAGTTTTGGTGCA |
|
GSU1305 |
gdhA |
-88 |
4.8 |
TGCATAAAATGCAGGCA |
|
GSU2806 |
nifEN |
-215 |
5.1 |
TGCATAAAAAATGAGCA |
|
GSU0938 |
Gmet_0693 |
-329 |
5.3 |
TGCATAAATAATGGGCA |
|
GSU1836 |
glnB |
-266 |
4.4 |
TGCCTGATAATTGTGCT |
|
GSU1836 |
glnB |
-253 |
4.1 |
TGCTCATTTGGTATGCA |
|
Geobacter uraniumreducens Rf4
|
|
Gura_0914 |
nifR |
9 |
5.3 |
TGCCCAAAAAATAGGCA |
|
Gura_2800 |
gdhA |
-168 |
4.4 |
TGCTTAATATTTAAGCT |
|
Gura_2800 |
gdhA |
-118 |
5 |
TGCCTATTTATGGTGCA |
|
Gura_1201 |
nifEN |
-228 |
5.3 |
TGCCCAATAATTGGGCA |
|
Gura_2229 |
glnB |
-266 |
4.2 |
TGCCCATCCATTGGGCA |
|
Gura_2229 |
glnB |
-234 |
4.3 |
TGCTCAATTTATAAGCT |
|
Geobacter sp. FRC-32
|
|
Geob_1718 |
nifR |
-42 |
5.4 |
TGCCCAAAATTTAGGCA |
|
Geob_2399 |
gdhA |
-191 |
4.5 |
TGAATAATTAATGTGCA |
|
Geob_2399 |
gdhA |
-172 |
4.1 |
TGCTTCTTGTTTGAGCA |
|
Geob_2399 |
gdhA |
-98 |
4.8 |
TGCCTGTTTATGGTGCA |
|
Geob_2581 |
nifEN |
-219 |
5.3 |
TGCCCAAATTATAGGCA |
|
Geob_1817 |
Gmet_0693 |
-323 |
4.4 |
TGCACAAAAAATAATCA |
|
Geob_2994 |
glnB |
-255 |
4.5 |
TGGTTATATATTGGGCA |
|
Geob_2994 |
glnB |
-224 |
4.7 |
TGCCTAATTTATGGGCT |
|
Geobacter sp. M21
|
|
GM21_1403 |
nifR |
-36 |
5.1 |
TGCTCATTTTTTAGGCA |
|
GM21_0175 |
gdhA |
-143 |
4.8 |
TGCATGTTTTTCGGGCA |
|
GM21_0175 |
gdhA |
-100 |
4.3 |
TGCATACAAATGTGGCA |
|
GM21_3137 |
Gmet_0693 |
-311 |
4.1 |
TGCACAAACAATAGGCT |
|
GM21_1183 |
glnB |
-158 |
4.2 |
TGCCGGAATGTTGTGCA |
|
Geobacter lovleyi SZ
|
|
Glov_0573 |
gdhA |
-136 |
4.3 |
TGTCTGCTTTTTGTGCA |
|
Glov_0573 |
gdhA |
-103 |
4.7 |
TGTATATTTAATATGCA |
|
Glov_0573 |
gdhA |
-84 |
4.2 |
TGACTTAATATTAGGCA |
|
Glov_3332 |
Gmet_0693 |
-268 |
4.1 |
TGCAAGATAGTTGGGCA |
|
Glov_3332 |
Gmet_0693 |
-213 |
4.1 |
TGCTGAATAAATGGTCA |
|
Glov_1879 |
glnB |
-154 |
4.3 |
TGCCTAATTTGTGTGCT |
|
Pelobacter propionicus DSM 2379
|
|
Ppro_3077 |
nifR |
-66 |
5.4 |
TGCCCAAATTTTAGGCA |
|
Ppro_3497 |
gdhA |
-101 |
4.2 |
TGCCGATAAAATGTGCT |
|
Ppro_3491 |
nifEN |
-230 |
4.6 |
TGCAAAAAAAACAGGCA |
|
Ppro_0484 |
Gmet_0693 |
-332 |
4.6 |
TGCCTGTTTTTTGCGCA |
|
Ppro_0484 |
Gmet_0693 |
-241 |
4.8 |
TGTATAAAAAATATGCA |
|
Ppro_1680 |
glnB |
-238 |
5 |
TGCCTAATTAAGGGGCA |
|
Ppro_1680 |
glnB |
-207 |
4.3 |
TGCCTATAATCAAGGCA |
|
Pelobacter carbinolicus str. DSM 2380
|
|
Pcar_2589 |
amtB |
-263 |
4.7 |
TGCCTCCATTATGGGCA |
|
Pcar_2589 |
amtB |
-242 |
4.5 |
TGCCTATTTTGGAAGCA |
|
Pcar_1021 |
glnK2 |
-241 |
4.4 |
TGCTCAAAATTTAAGCC |
|
Pcar_1500 |
glnB |
-306 |
4.1 |
TGTTTAAATAATAGTCA |
|
Pcar_1500 |
glnB |
-274 |
4.9 |
TGTCTAAATATTGGGCA |
|
Desulfuromonas acetoxidans DSM 684
|
|
Dace_0518 |
nifR |
-10 |
5.1 |
TGCCTAAATAATGAGCA |
|
Dace_2426 |
gdhA |
-126 |
4.6 |
TGTTTATAAAATGTGCA |
|
Dace_0726 |
nifEN |
-310 |
4.5 |
TGCTTAAACTTTGAGCA |
|
Dace_1145 |
amtB |
-219 |
4.9 |
TGCCCGTTTTTCAGGCA |
|
Dace_1046 |
glnB |
-254 |
4.3 |
TGCTTAAAATGTCAGCA |
|
Dace_1046 |
glnB |
-222 |
4.1 |
TGAGTAAATAATGTGCA |
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Regulatory Sites
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