Regulon of NtrC in Geobacter sp. FRC-32

Properties
Regulator type:	Transcription factor
TF locus tag:	Geob_1720
Regulator family:	Fis
Regulation mode:	activator (repressor)
Biological process:	Nitrogen assimilation
Effector:	Phosphorylated NtrB, signal histidine kinase
Regulog:	NtrC - Desulfuromonadales
Statistics of regulated genes:
- Genes	10
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 56 sites [see more]

Member of regulog collections

By taxonomy - Desulfuromonadales
By trascription factor - NtrC
By TF family - Fis
By effector - Phosphorylated NtrB, signal histidine kinase
By pathway - Nitrogen assimilation

Regulated operons
	Locus Tag	Name	Function
Position: -191 Score: 4.5 Sequence: TGAATAATTAATGTGCA Position: -172 Score: 4.1 Sequence: TGCTTCTTGTTTGAGCA Position: -98 Score: 4.8 Sequence: TGCCTGTTTATGGTGCA Locus tag: Geob_2399 Name: gdhA Funciton: NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
	Geob_2399	gdhA	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
Position: -323 Score: 4.4 Sequence: TGCACAAAAAATAATCA Locus tag: Geob_1817 Name: Gmet_0693 Funciton: Conserved hypothetical protein Locus tag: Geob_1818 Name: glnK1 Funciton: Nitrogen regulatory protein P-II Locus tag: Geob_1819 Name: amtB Funciton: Ammonium transporter
	Geob_1817	Gmet_0693	Conserved hypothetical protein
	Geob_1818	glnK1	Nitrogen regulatory protein P-II
	Geob_1819	amtB	Ammonium transporter
Position: -219 Score: 5.3 Sequence: TGCCCAAATTATAGGCA Locus tag: Geob_2581 Name: nifEN Funciton: Nitrogenase FeMo-cofactor scaffold and assembly protein
	Geob_2581	nifEN	Nitrogenase FeMo-cofactor scaffold and assembly protein
Position: -255 Score: 4.5 Sequence: TGGTTATATATTGGGCA Position: -224 Score: 4.7 Sequence: TGCCTAATTTATGGGCT Locus tag: Geob_2994 Name: glnB Funciton: Nitrogen regulatory protein P-II Locus tag: Geob_2993 Name: glnA Funciton: Glutamine synthetase type I (EC 6.3.1.2)
	Geob_2994	glnB	Nitrogen regulatory protein P-II
	Geob_2993	glnA	Glutamine synthetase type I (EC 6.3.1.2)
Position: -42 Score: 5.4 Sequence: TGCCCAAAATTTAGGCA Locus tag: Geob_1718 Name: nifR Funciton: Predicted oxidoreductase, FAD binding Locus tag: Geob_1719 Name: ntrB Funciton: Nitrogen regulation protein NR(II) (EC 2.7.3.-) Locus tag: Geob_1720 Name: ntrC Funciton: Nitrogen regulation protein NR(I), Fis family
	Geob_1718	nifR	Predicted oxidoreductase, FAD binding
	Geob_1719	ntrB	Nitrogen regulation protein NR(II) (EC 2.7.3.-)
	Geob_1720	ntrC	Nitrogen regulation protein NR(I), Fis family

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD